LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Rops1g02068	ATGTCGGCTTACACAGACGAAGATCCCCGTCTTCATGGCATCAAAACTAAGATTCGTGTCGTCCCCAATTTCCCCAAATCCGGTATTATGTTCCAAGACATTACTACTCTTTTGCTTGATCCCAAAGCTTTTAAGGACACTATAGATTTGTTCGTTGAGCGATACAAGGGAAAAAGTATTTCTGTTGTTGCAGGAATTGAAGCTCGGGGCTTTATTTTTGGCCCTCCCATTGCACTGGCAATAGGAGCAAAGTTTGTACCATTGAGGAAGCCAAAGAAGTTGCCTGGCAAAGTTATTTCTCAAGAATATATTCTGGAATATGGAAGGGACTGTCTTGAGATGCATGTTGGAGCAGTTGAATCTGGTGAGCGTGCTTTAGTGGTTGATGATTTGATTGCAACTGGTGGAACGCTCTGTGCAGCTATGGACTTACTAGAACGTGTGGGAGCAGAGGTAGTGGAGTGTGCATGTGTAATTGAATTACCTGAGTTGAAGGGTCGTGAACGTTTGAATGGGAAGCCGTTGCATGTGTTGGTGGAATACTTCGAGATTTGA	555	0.4378	MSAYTDEDPRLHGIKTKIRVVPNFPKSGIMFQDITTLLLDPKAFKDTIDLFVERYKGKSISVVAGIEARGFIFGPPIALAIGAKFVPLRKPKKLPGKVISQEYILEYGRDCLEMHVGAVESGERALVVDDLIATGGTLCAAMDLLERVGAEVVECACVIELPELKGRERLNGKPLHVLVEYFEI*	185

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Rops1g02068	184	PANTHER	ADENINE PHOSPHORIBOSYLTRANSFERASE	5	180	-	-
	Rops1g02068	184	NCBIfam	adenine phosphoribosyltransferase	14	180	IPR005764	GO:0003999\|GO:0005737\|GO:0006168
	Rops1g02068	184	Hamap	Adenine phosphoribosyltransferase [apt].	14	181	IPR005764	GO:0003999\|GO:0005737\|GO:0006168
	Rops1g02068	184	FunFam	Adenine phosphoribosyltransferase 1	2	181	-	-
	Rops1g02068	184	Pfam	Phosphoribosyl transferase domain	47	167	IPR000836	-
	Rops1g02068	184	CDD	PRTases_typeI	48	180	IPR000836	-
	Rops1g02068	184	Gene3D	-	2	181	IPR029057	-
	Rops1g02068	184	SUPERFAMILY	PRTase-like	13	178	IPR029057	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Rops1g02068	Rops-Chr1	41627963	41632115	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Rops1g02068	1	180	PRT Gene Family	AT1G27450	74.444	2.39e-95	273

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Rops1g02068	K00759		-	gmx:100306411	352.443

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