Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g02068 ATGTCGGCTTACACAGACGAAGATCCCCGTCTTCATGGCATCAAAACTAAGATTCGTGTCGTCCCCAATTTCCCCAAATCCGGTATTATGTTCCAAGACATTACTACTCTTTTGCTTGATCCCAAAGCTTTTAAGGACACTATAGATTTGTTCGTTGAGCGATACAAGGGAAAAAGTATTTCTGTTGTTGCAGGAATTGAAGCTCGGGGCTTTATTTTTGGCCCTCCCATTGCACTGGCAATAGGAGCAAAGTTTGTACCATTGAGGAAGCCAAAGAAGTTGCCTGGCAAAGTTATTTCTCAAGAATATATTCTGGAATATGGAAGGGACTGTCTTGAGATGCATGTTGGAGCAGTTGAATCTGGTGAGCGTGCTTTAGTGGTTGATGATTTGATTGCAACTGGTGGAACGCTCTGTGCAGCTATGGACTTACTAGAACGTGTGGGAGCAGAGGTAGTGGAGTGTGCATGTGTAATTGAATTACCTGAGTTGAAGGGTCGTGAACGTTTGAATGGGAAGCCGTTGCATGTGTTGGTGGAATACTTCGAGATTTGA 555 0.4378 MSAYTDEDPRLHGIKTKIRVVPNFPKSGIMFQDITTLLLDPKAFKDTIDLFVERYKGKSISVVAGIEARGFIFGPPIALAIGAKFVPLRKPKKLPGKVISQEYILEYGRDCLEMHVGAVESGERALVVDDLIATGGTLCAAMDLLERVGAEVVECACVIELPELKGRERLNGKPLHVLVEYFEI* 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g02068 184 PANTHER ADENINE PHOSPHORIBOSYLTRANSFERASE 5 180 - -
Rops1g02068 184 NCBIfam adenine phosphoribosyltransferase 14 180 IPR005764 GO:0003999|GO:0005737|GO:0006168
Rops1g02068 184 Hamap Adenine phosphoribosyltransferase [apt]. 14 181 IPR005764 GO:0003999|GO:0005737|GO:0006168
Rops1g02068 184 FunFam Adenine phosphoribosyltransferase 1 2 181 - -
Rops1g02068 184 Pfam Phosphoribosyl transferase domain 47 167 IPR000836 -
Rops1g02068 184 CDD PRTases_typeI 48 180 IPR000836 -
Rops1g02068 184 Gene3D - 2 181 IPR029057 -
Rops1g02068 184 SUPERFAMILY PRTase-like 13 178 IPR029057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g02068 Rops-Chr1 41627963 41632115 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops1g02068 1 180 PRT Gene Family AT1G27450 74.444 2.39e-95 273
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g02068 K00759 - gmx:100306411 352.443