Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g02067 ATGGCTGGTGGGTGGGTGAAGTCATTGCACTGCAAGTCAAGAGCATATGAAGATGTTTACCATTCAAACACTAAAAACCTCATACCCAGTGCTGGTTGCAGAAAGAGTGTTCAGAACATCAAAGATGTGGTGGTGGACACTACCAAGCCCAAGCCCAAGCCCAAGAAACCGCTGCAAAAACACCCAAGCTCTAGATACCCAACCACTGCCACCAAACCCGATTTCGAAACCACCATTAACCGTTCACGAAGTACCACCACCACCACCACTCGTCATGCTCCAACGCCGGACCCTCGTTTCCCTTCCCTCACGGAGCTTCAAGAGGGGCATCCTTCGCGTAACGTGGTGGAGATTATCTTTCACACTAGCTGGGGTCCCAAACAGTTTTCGGGTCGGGTTGAGATGATATTCAAGGTTCATAACGGTTCACGAACGGTGACACGGTTTGAAGAGTATCGTGAGGTGGTTAAGGGTCGGGCCGGTTCGGAAAGTCCGACCCGGGAGAACAACTGGGAGGAGAATGCACGGTGCGTTGCGGATGGGAATGAGATGATGAGGTTTCACTGTTTGGGTCCCACATCGGGTGGTGGTCCTTACGGTGGAGCTTGTGCGTGGTCGTTCCCCGGAGGAAAAGGGTCGGCGATCTGCACGTTCTCCGGTAGCGGTGGGGCCCATGAGAGCTCCGGTGGAGGTAGGGGAAGAAGGGCTATGTTGGTGTGTCGGGTCATAGCGGGTCGGGTTTCGAAACAAATAGGGTTTATGGACTCGTTGTTGGATGGGCGAGTTGGGTTCGACTCGGTGAGTGGGGACAACGGCGAGTTGTTTGTGTTTGACTCGCGTGCTGTATTGCCCTGTTTTCTTATCATTTATAAATTGTAA 879 0.5267 MAGGWVKSLHCKSRAYEDVYHSNTKNLIPSAGCRKSVQNIKDVVVDTTKPKPKPKKPLQKHPSSRYPTTATKPDFETTINRSRSTTTTTTRHAPTPDPRFPSLTELQEGHPSRNVVEIIFHTSWGPKQFSGRVEMIFKVHNGSRTVTRFEEYREVVKGRAGSESPTRENNWEENARCVADGNEMMRFHCLGPTSGGGPYGGACAWSFPGGKGSAICTFSGSGGAHESSGGGRGRRAMLVCRVIAGRVSKQIGFMDSLLDGRVGFDSVSGDNGELFVFDSRAVLPCFLIIYKL* 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g02067 292 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 5 290 - -
Rops1g02067 292 Gene3D - 101 291 - -
Rops1g02067 292 SUPERFAMILY ADP-ribosylation 102 291 - -
Rops1g02067 292 MobiDBLite consensus disorder prediction 44 108 - -
Rops1g02067 292 MobiDBLite consensus disorder prediction 62 95 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g02067 Rops-Chr1 41622805 41623884 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops1g02067 102 291 C2H2 Transcription Factor Family AT5G54630 36.161 2.06e-31 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g02067 - - gmx:100804686 418.313
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops1g02067 1 41622805 41623884 Rops1g02067 1 41622805 41623884 ECH