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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Rops1g02028
ATGGCACCCAAGAAGGATGAACCAATTAGGAAAACAATGAACAGAGGAGCATGGACACCCGAGGAAGATCAGAAGCTAGTTCAGTGCATTGAAATTCACGGTGCAAAGAGGTGGAAGACTGTTGCAGTTAAATCAGGTCTAAACAGATGTGGAAAGAGTTGCAGGTTGAGATGGTTAAACTATCTGAGACCCAATATTAAGAGGGGCAACATATCAGTTGAAGAAGTTGATTTGATTATTAGGCTTCACAAACTATTGGGAAACAGGTGGTCTTTGATAGCTAAGAGGCTTCCAGGACGAACAGACAATGAAATTAAAAACTATTGGAATACTTATTTGTGCAAAAAAGTTAATCACGAAAAGGCAAAAACAGAAACTTCAGTGGCGCAAGAAACACATACGACTCAGGATAATGGGGAAAGAGCAGCTTTGGAGATTGAGGAGGCCATTGATGTAAGTGGGGACTCAGAAGGTAACTTTGATGTGAATGAATTCTTCAACTTCTCCATTGAAGGACCCTTTGCGCTGGATGGGATGCACAAGTATCTAGAACTTGATGAAATTCCAGATATCGTGGAGTAG
582
0.4107
MAPKKDEPIRKTMNRGAWTPEEDQKLVQCIEIHGAKRWKTVAVKSGLNRCGKSCRLRWLNYLRPNIKRGNISVEEVDLIIRLHKLLGNRWSLIAKRLPGRTDNEIKNYWNTYLCKKVNHEKAKTETSVAQETHTTQDNGERAALEIEEAIDVSGDSEGNFDVNEFFNFSIEGPFALDGMHKYLELDEIPDIVE*
194
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Rops1g02028
193
ProSiteProfiles
Myb-like domain profile.
10
62
IPR001005
-
Rops1g02028
193
Pfam
Myb-like DNA-binding domain
15
62
IPR001005
-
Rops1g02028
193
Pfam
Myb-like DNA-binding domain
68
113
IPR001005
-
Rops1g02028
193
ProSiteProfiles
Myb-type HTH DNA-binding domain profile.
10
66
IPR017930
-
Rops1g02028
193
Gene3D
-
72
145
-
-
Rops1g02028
193
PANTHER
TRANSCRIPTION FACTOR MYB8-RELATED-RELATED
11
136
-
-
Rops1g02028
193
Gene3D
-
9
68
-
-
Rops1g02028
193
SUPERFAMILY
Homeodomain-like
13
109
IPR009057
-
Rops1g02028
193
FunFam
Transcription factor TT2
71
141
-
-
Rops1g02028
193
CDD
SANT
72
113
IPR001005
-
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Rops1g02028
Rops-Chr1
40911894
40912947
Dispersed/Wgd
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Rops1g02028
5
176
MYB Transcription Factor Family
AT5G52600
48.295
2.98e-50
159
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Transcription factors information
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Regulatory Factors
Family
Gene
Hmm_acc
Hmm_name
E_value
Clan
TF
MYB
Rops1g02028
Myb_DNA-binding
9e-18
CL0123
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Rops1g02028
K09422
-
gmx:100791381
303.523
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