Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g02006 ATGTGCCGGCAAAATTCTCCGGTACATCATTCCGGCGAAGAAGAAATTGCAGCTGATGAGAGCCTTTTGATTTATTGCAAGCCTGTTGAACTCTACAATATTCTCTATCGTCGTACTCTTCATAATCCTACTTTTCTAGGGAGATGTTTGCGATATAAAATAAGAGCAAGGCGTAAAAGGAGGTTGCGAGCAGGAATTGTGATTTTCAACTATAGGGACTGTTACAACATGCTTCGAAAGACTGAAGTGACTGAAGACTTTTCTTGTCCATTTTGCTTGATGCAGTGTGCGAGCTTTAAGGGTTTGCGATTTCATCTTTGTTCATCACATGATCTATTCAACTTTGAGTTCTGGGTTACTGAAGATTACCAAGCAGTGAATGTCTCCGTAAAAATTGAAATATTGAGATCAGAGAATGTTGCTGATGGAGTAATTCCACAATCACAAACCTTCTTCTTCTGTTCAAGACCTCAAAAACGGAGACGAAAGGACTCTGTTCAGAATGAAAAGCGTGCCAATGTAAAGTTCCTGGAGTTGGACTCACCAGAAGGCATGCAGAATGGATTTCTACAGAAAAATGATGATATCCTGTCCTGCAAAGGGGAGAACATGTCTAGAGCATCTCGTAGTGAGAAGAATTTGCAGAATGAACAACATAGTGGGGGAAAATGTGGTCCTGATCATCCTGGCCCCACAGACTACATGGAACATGTTGATTCCAGTTTCAACATGCCGGGTGTTTCAATTGCCATGCCCCAATCTTCTGGGGACCCTCCTGAATGTAGTAAATCAATGTATAGAAGTGATCCTGCTCTGCCTACTAAACCAAAGAAGTTAAATATGGATCGATCAGATTCAAGAAATCGTATGCTCCTGCAGAAGAGACAGTTCTTTCACTCACACAGAGTTCAGCCTATGGCCCTAGAACAAGTATTATCAGATCGTGATAGTGAAGATGAAGTTGATGATGACATTGCTGATCTTGAAGATAGAAGGATGCTTGATGATTTTGTGGATGTTTCCAAAGATGAAAAGAAGCTCATGCATCTCTGGAACTCTTTTATGAGGAAACAAAGGGTGCTGGCTGATGGTCATGTTCCATGGGCCTGTGAGGCATTCTCCAAGCTTTATGGAAAGGAGCTGATCTCATTCCCAGCTTTATTTTGGTGTTGGAGATTATTCATGATCAAACTTTGGAATCATGGTCTTCTTGATGCCAGCACAATGAACAACTGTAGTATAATATTAGATGGTTACAGAAACGAGGGATTGGATTCTGGCAAAAATTAA 1290 0.4101 MCRQNSPVHHSGEEEIAADESLLIYCKPVELYNILYRRTLHNPTFLGRCLRYKIRARRKRRLRAGIVIFNYRDCYNMLRKTEVTEDFSCPFCLMQCASFKGLRFHLCSSHDLFNFEFWVTEDYQAVNVSVKIEILRSENVADGVIPQSQTFFFCSRPQKRRRKDSVQNEKRANVKFLELDSPEGMQNGFLQKNDDILSCKGENMSRASRSEKNLQNEQHSGGKCGPDHPGPTDYMEHVDSSFNMPGVSIAMPQSSGDPPECSKSMYRSDPALPTKPKKLNMDRSDSRNRMLLQKRQFFHSHRVQPMALEQVLSDRDSEDEVDDDIADLEDRRMLDDFVDVSKDEKKLMHLWNSFMRKQRVLADGHVPWACEAFSKLYGKELISFPALFWCWRLFMIKLWNHGLLDASTMNNCSIILDGYRNEGLDSGKN* 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g02006 429 MobiDBLite consensus disorder prediction 204 232 - -
Rops1g02006 429 Pfam VEFS-Box of polycomb protein 279 414 IPR019135 -
Rops1g02006 429 CDD VEFS-box_EMF2-like 292 419 - -
Rops1g02006 429 MobiDBLite consensus disorder prediction 250 282 - -
Rops1g02006 429 CDD ZnB-Zn_EMF2-like 13 134 - -
Rops1g02006 429 PANTHER POLYCOMB GROUP PROTEIN 9 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g02006 Rops-Chr1 40398397 40411299 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops1g02006 1 68 C2H2 Transcription Factor Family AT5G51230 57.353 2.21e-12 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g02006 - - gmx:100807112 726.087