Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g01975 ATGTCTGTGGCTCCAAAATCCCAACGTGGACAAAACAAACCCAAGTGCAAACAGTGTGGCAATGTTGCTCGCTCTAGGTGTCCATATGAATCATGCAAGAGTTGCTGTTCAAGAAATCAAAATCCGTGTCATATTCATGTGTTGAAAGCAAATTCAACTTTACTCGACAAGACACCATCTTCTATTGCCGCTCAACTTGATCAGCAATCTTTGGAGACATCTCAATCAACAAGTGCAAGTAGAGTTGCATCACTTCGACAACTTTCCAACAGTTTTGCCCAATTCAATAATTTGAACATTTCACTTCATTCGAGGAAGCCACTAAGTAGAAAGGAAGCTGCAGCCATAAATGAATGGAGATTTTCGAAGTTAAAGGAATACAAGGAGCAAAATATTGAGGTTGAAAATGAAACTTTTGACCAATACATGCAGAATGTAGAGCTACTGGAAGAAGTATTGTCTGTGAAGTCTATGGAAGAAAATATGACTTTTGCATCAGAGTCTGCTACTTCTTCAATGGAAAACGACAATGAGATAATGGTCACAGGGTTGAAATTGCTGCTAAGATCAAACTCTATGAGAAGTGATAGTCTAAAAATGAGAATACAACAACTTGTAGATAGGGGATTAAAGAAGCTTAAGAAGTCTGCAGAGGATGATGACATCGATAAACCAATTGATGAAGAAACTAATAAAGCTTCAAAAAGGGCAAAAAGTTGTAGGTCGGAAAGGTTATCTGTTACAAGTGATCTTATTGATAAAATTAACAAAGCCCGTAGTGAGGAGGATTTGAACTCTTGCTTGGAGATGAAGTCCCAACTCTTCAATTTGGAAGTTGACACTGCCATAACAGAACTTCAAGACAATGAAACACATGAAAATGAAATTGTTGAAAACAATTCAACCTCAGCAAAAGAATTGGATTATTCTTTACCAAATTTGGTTGTTACTGCTGAAATTGATCAAGAAACTCTAAACACGGTAGACAGATATGTGTCTTCCCTTGAGCAGTTAGAGGGGTTATGA 1026 0.3743 MSVAPKSQRGQNKPKCKQCGNVARSRCPYESCKSCCSRNQNPCHIHVLKANSTLLDKTPSSIAAQLDQQSLETSQSTSASRVASLRQLSNSFAQFNNLNISLHSRKPLSRKEAAAINEWRFSKLKEYKEQNIEVENETFDQYMQNVELLEEVLSVKSMEENMTFASESATSSMENDNEIMVTGLKLLLRSNSMRSDSLKMRIQQLVDRGLKKLKKSAEDDDIDKPIDEETNKASKRAKSCRSERLSVTSDLIDKINKARSEEDLNSCLEMKSQLFNLEVDTAITELQDNETHENEIVENNSTSAKELDYSLPNLVVTAEIDQETLNTVDRYVSSLEQLEGL* 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g01975 341 PANTHER ELECTRON CARRIER/IRON ION-BINDING PROTEIN 4 341 - -
Rops1g01975 341 Coils Coil 132 152 - -
Rops1g01975 341 MobiDBLite consensus disorder prediction 214 239 - -
Rops1g01975 341 Pfam Domain of unknown function (DUF702) 15 77 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g01975 Rops-Chr1 39992540 39996798 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SRS Rops1g01975 DUF702 0.00013 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g01975 - - gmx:100816049 462.225