Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g01952 ATGGAGCGGATGAGACTCTTACTGATCTTGATTACTATTTTGTTCAATACTCCAACTCTGAGGGGCGGTGAACTTCTATGTCCAGACTACTACAAAGAGAAGTGTCCCTTAGCTGAAGACATCGTGAGACATAACGTGGCGGCGGCAGTTTTCAAAGATCCTCGTTTGGCAGCCTCACTACTTCGCTTACACTTTCATGATTGTTTTGTCATGGGGTGCGATGCATCGGTACTTTTGGACAGTGTTGAAGGCATGACAAGTGAAAAGCTGGCAGGACCAAATCTGAACTCTCTACGTGGATTCGAGATCATAGACAAGATAAAGCATTTGCTGGAAGAGAAATGTCCTCTCACTGTTTCATGTGCTGACATCCTTGCCATGGTTGCTCGTGATGCTGTTGAACTGAGAGGAGGACCAAGATGGGATGTCTTGCTGGGGAGGAAGGACTCTTTGGAGTCAAGTTTCAGTGGAGCTAACCTATATATCCCTGCACCAAATTTCACTCTAGAGGCTCTCATCAATAATTTTAAGCAACAGGGTCTGGACATAGAAGACTTGGTGGTTCTATCAGGTAGCCATACTATAGGAAGGGCAAGATGTACAAACTTCAGGCAGAGGGTCTATGAAGCAAAACAGGAATATTACTATGGCTATGATCGCTATAAGCGATACACAACCTTTAGAAGAATCCTACGTTCTATATGCCCTGTTACGGGAAGGGACAACAAATTTGCTCCCTTGGATTTTCAAACCCCTACAAGGTTTGATAACAACTACTTCATAAACATTCTGGAAGGAAAGGGCCTGTTAGGTTCTGATAATGTTTTGATAACCCAGGACTTCCATGGAAAAATAAGGGAACAGGTGTGGGCTTATGCCTCCAACGAAAAACTTTTCTTTGCTTCATTTGCTAAATCTATGATCAAGATGGGAAACATCAATGTTCTCACAGGACATGAAGGAGAAATTAGGAGGAATTGTAGGTTTGTCAATGTTTAG 999 0.4294 MERMRLLLILITILFNTPTLRGGELLCPDYYKEKCPLAEDIVRHNVAAAVFKDPRLAASLLRLHFHDCFVMGCDASVLLDSVEGMTSEKLAGPNLNSLRGFEIIDKIKHLLEEKCPLTVSCADILAMVARDAVELRGGPRWDVLLGRKDSLESSFSGANLYIPAPNFTLEALINNFKQQGLDIEDLVVLSGSHTIGRARCTNFRQRVYEAKQEYYYGYDRYKRYTTFRRILRSICPVTGRDNKFAPLDFQTPTRFDNNYFINILEGKGLLGSDNVLITQDFHGKIREQVWAYASNEKLFFASFAKSMIKMGNINVLTGHEGEIRRNCRFVNV* 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g01952 332 PRINTS Plant peroxidase signature 184 196 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops1g01952 332 PRINTS Plant peroxidase signature 137 152 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops1g01952 332 PRINTS Plant peroxidase signature 262 279 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops1g01952 332 PRINTS Plant peroxidase signature 305 318 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops1g01952 332 PRINTS Plant peroxidase signature 99 112 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops1g01952 332 PRINTS Plant peroxidase signature 118 128 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops1g01952 332 PRINTS Plant peroxidase signature 35 54 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops1g01952 332 PRINTS Plant peroxidase signature 59 79 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops1g01952 332 PRINTS Plant peroxidase signature 246 261 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops1g01952 332 FunFam Peroxidase 29 167 - -
Rops1g01952 332 Gene3D Peroxidase, domain 2 163 310 - -
Rops1g01952 332 Pfam Peroxidase 42 294 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops1g01952 332 ProSiteProfiles Plant heme peroxidase family profile. 25 331 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops1g01952 332 Gene3D - 29 331 - -
Rops1g01952 332 FunFam Peroxidase 163 310 - -
Rops1g01952 332 ProSitePatterns Peroxidases active site signature. 57 68 IPR019794 GO:0004601
Rops1g01952 332 CDD secretory_peroxidase 26 330 IPR033905 GO:0004601|GO:0042744
Rops1g01952 332 ProSitePatterns Peroxidases proximal heme-ligand signature. 185 195 IPR019793 -
Rops1g01952 332 SUPERFAMILY Heme-dependent peroxidases 26 331 IPR010255 GO:0004601|GO:0006979|GO:0020037
Rops1g01952 332 PANTHER PEROXIDASE 72-RELATED 26 330 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops1g01952 332 PRINTS Haem peroxidase superfamily signature 248 263 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops1g01952 332 PRINTS Haem peroxidase superfamily signature 119 136 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops1g01952 332 PRINTS Haem peroxidase superfamily signature 137 149 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops1g01952 332 PRINTS Haem peroxidase superfamily signature 57 71 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops1g01952 332 PRINTS Haem peroxidase superfamily signature 185 200 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g01952 Rops-Chr1 39598719 39600944 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops1g01952 85 332 Peroxidase AT2G35380 64.113 1.64e-121 348
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g01952 K00430 - gmx:100778051 574.318