Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g01949 ATGGTGTCAATAGATTACTTGTGGTTCATTGTAGCAGCAGCTTTGTTGGGTGGATATGCATTTGTGTTTGGGTTCCTTAGGAGAATGAATGAATGGTACTACGTTGGTAGGCTGGGAAAGATGCAATACCCTCTCCCACCTGGTGATCTTGGTTGGCCTTTCTTGGGGAACATGTTCACCTTCCTCAAAGCTTTCAAGTCTGATCCTGATTCCTTCATCTATAACCTTGTTTCCAGATATGGCAGGAGTGGCATGTACAGGACACACTTGTTTGGGAGTCCCAGCATCATAGTTTGCACCCCAGAGACATGCCGTAAGGTTCTTACAGATGAGGAGCAACTCAAGCTTGGTTACCCTGCTTCCACCATGGCCCTTACAGGAAAAAGATCATTTCATGGCATCTCAAATGCTGAGCACAAACGTCTGCGCCGCCTAATCACCTCTCCCATAAATGGTCACGAGGCATTGTCCATGTATATTGACCTCATAGAGGGTATTGCTGTGAAACATTTGGAAGAGTTGTCTTGCATGAACACCCCATGTGAGTTCCTCAAAGAGATGAGAAAGTTCGCTTTTGCTGTCATCTCCACCATCTTCGTGGCTTCTGATAGTGATCATGTTGATCTTGGCTCCGTTGAAAACTTATACACCGATTTGAATCGGGGAATGAAGTCCCTTGCCATCAATCTCCCTGGCTTTGCATTCCGTAAAGCACTCAAGGCACGAAAGAAGTTGATGAAGTTGCTGCAAGCCCTGGTGGACCGAAAGAGGAGGACCAATAATACAGAGAAGAAGAAAGATATGACGGATTTATTGATGGAAGTCAAAGATGAAGAGGGTAGGCAGCTGGAGGATGAAGACATTATAGACCTACTTCTGATTTTCTTGTTAGCTGGTCATGAAAGCTCTGCTCATGGAATATTGTGGACTATCATCTATCTCATGGAACACCCACATGTCTTCCAGACGGCCAAGAAAGAACAAGAAGAGATCATGGAAAGAAGACCCTCCACACAGAAAGGGTTGAACCTTAAGGAAATTAAGCAAATGGAATATCTCTCAAAGGTTATTGATGAGATGTTGCGCAGAACAAGTATCTCGTTTGCTAACTTTAGACAAGCAAAAGTGGATGTCAACATCAATGGTTATACTATACCAAAAGGATGGAAAGTTCTGGTTTGGAACCGGGGTGTTCACATGGATCCTGAAACTTACCTTAACCCAAAGGAATTCAATCCTTCCAGATGGGAAAATTACAATGCAAGAGCAGGGTCTTTCCTTCCATTTGGATTAGGAAGCAGGTTTTGTCCCGGAAGTGACCTGGCCAAGCTTGAGATCACCATTTTCCTCCATCATTTTCTTCTCAACTACAGGATGGACAGAATTAATCCAGAGTGTCCAGTTACTTACCTACCAGTGCCAAGGCCTTCAGACAATTGCCTTGCAAGAATTATAAAAGCCACATAA 1467 0.439 MVSIDYLWFIVAAALLGGYAFVFGFLRRMNEWYYVGRLGKMQYPLPPGDLGWPFLGNMFTFLKAFKSDPDSFIYNLVSRYGRSGMYRTHLFGSPSIIVCTPETCRKVLTDEEQLKLGYPASTMALTGKRSFHGISNAEHKRLRRLITSPINGHEALSMYIDLIEGIAVKHLEELSCMNTPCEFLKEMRKFAFAVISTIFVASDSDHVDLGSVENLYTDLNRGMKSLAINLPGFAFRKALKARKKLMKLLQALVDRKRRTNNTEKKKDMTDLLMEVKDEEGRQLEDEDIIDLLLIFLLAGHESSAHGILWTIIYLMEHPHVFQTAKKEQEEIMERRPSTQKGLNLKEIKQMEYLSKVIDEMLRRTSISFANFRQAKVDVNINGYTIPKGWKVLVWNRGVHMDPETYLNPKEFNPSRWENYNARAGSFLPFGLGSRFCPGSDLAKLEITIFLHHFLLNYRMDRINPECPVTYLPVPRPSDNCLARIIKAT* 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g01949 488 PANTHER CYTOCHROME P450 26 43 472 - -
Rops1g01949 488 PRINTS E-class P450 group I signature 287 304 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g01949 488 PRINTS E-class P450 group I signature 394 418 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g01949 488 PRINTS E-class P450 group I signature 426 436 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g01949 488 PRINTS E-class P450 group I signature 307 333 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g01949 488 PRINTS E-class P450 group I signature 436 459 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g01949 488 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 429 438 IPR017972 GO:0005506|GO:0016705
Rops1g01949 488 PRINTS P450 superfamily signature 355 366 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g01949 488 PRINTS P450 superfamily signature 436 447 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g01949 488 PRINTS P450 superfamily signature 298 315 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g01949 488 PRINTS P450 superfamily signature 427 436 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g01949 488 Gene3D Cytochrome P450 37 486 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g01949 488 SUPERFAMILY Cytochrome P450 42 484 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g01949 488 Pfam Cytochrome P450 46 462 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g01949 Rops-Chr1 39553066 39556086 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops1g01949 7 487 Cytochrome P450 AT2G32440 55.464 0.0 556
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g01949 K04123 - qsu:112005461 694.886