Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g01947 ATGGCACTGTGCAACCTCTTTGGTTGCTTCAAAGCAGCTAAGACTAACGAACCACAAGTTATCTTGGCAGAGACGACTGAGCCATTGGATGAAACCCTAGGCCATTCCTTTTGCTATGTTAGATCTTCACCTCGCTTTCTTTCCCCTACTACTCATTCCGATCGCTTTCTCTCTCCTTCTAACTCCCTTCGTTTCTCTCCCTCTCATGAGCCACTTCCCAGGACCCGACCCGATTCCGCATTCAGGGCCATTTCCGGAGCATCCGTTAGTGCTAACAGTTCCGTTCCCAAAACCGTTCTTCAGTTACACGACATTTACGACGATGTCGCTGCTGCTGGTGGGGGTAATATAGTAAATGGCTTCAAGAGTACGTCGTCGTTTAGTGCTCTCCCGCTTCAGCCTGTTCCTAAAGGGGGTGAGAGGAGGGCTTCCTTCCTCTCCGGTCCAATTGAGAGCGGCCACTCCGGTCCACTAGACGACGGCGCAGCCGGTGAGGTACCTTTCTCTGCTCCTCTTGGGGGGTTGTATGTCAAGAGGAAGCGCAAGAAGGGTATTGCCGGGTTCCGGAAGGCCTTCCGGGGGAATGTGTCGGAGAAGAAGCGGCCATGGGTGGTGCCGGTGTTGAATTTCGTAGGCAGGAAGGAGGTTCCGGTGGTGAGTGAAGGGAAGACGGAGGTGAAGAGTGAGAGTGCTGTGCAGTGGGCGCTGGGGAAGGCAGGGGAGGATCGGGTGCACGTGGTTGTATCCGAAGAGCAGGGTTGGTTGTTTGTGGGAATCTACGATGGTTTCAATGGCCCTGATGCGCCGGAGTTTCTAATGGGTCATCTTTACCGTGCTGTTTACAGTGAGCTGCAGGGGTTGTTTTGGGAAGTTGATGAGGTACAGGAAACTAGCCCTGTAGTTGTGGATGAAACTGAACCTGAAAATGAGGGGGAGGTTGAGCATGATTCAAACTCTTTTCAAGGATCCACTAAGAGAGTAACCTTTCAAGCTGATGGAAATGAAAGTAGGAGGCGGAGGCTGTGGGAATTTCTTGCAGAAGATGATGCTGAAGATGGGCTTGACCTTTCAGGGTCAGATAGATTTGCTTTTTCTGTGGATGATGCACTCAAGGTTACCAAGGAGGGCTCAGCAGGTAGTAGACGGTGGCTGCTTTTGTCCAAGTTGAAGCATGGATTATCCAAGCATAAGGAGGGTCATGGCAGAAAGTTGTTGCCCTGGAACTTGGGCACAGAGGAGAAGGATAAGGTCGAGGTGGAAAATCAGGCAGAGGAGAAGCCTCATGGTGGTGATCATGGTAGGAAGCGGAAAGTGGGTCCTGTAGATCATGATTTGGTTTTGAAGGCAATGTCTCGGGCACTTGAGATGACTGAACTTGCATATTTGGATATGACAGATAAGGTTATTGATACGAACCCAGAGCTTGCTTTAATGGGGTCATGTCTGCTAGTTGTTTTAATGAGGGATGAGGATGTTTATGTGATGAATGTGGGAGATAGCCGGGCCATAGTGGCACATTATGAGTGCAAAGAGGTTAATTCTAGTAAGGAATCAGGAATCAAAGGAGATATTAGCATGGAGAGCATAGTGGAGGAGTCCTTAGCTCCAGGTGAAAGTGCTGTCAAGTTGGGTCAAGAAATGAGGTTGGTGGCATTGCAGCTGTCCACGGACCACAGCACGAGCATTGAAGAGGCAATCATTAGGATTAAAAATGAACATCCTGATGACAGCCATTGTATTGTAAATGATAGAGTGAAAGGCCGTCTTAAGGTTACCAGAGCATTTGGGGCTGGATTTTTGAAACAGCCAAAGTGGAATGATGTAGTACTAGAAATGTTTCGTAATGAATATATTGGCACTGCTCCATATATATCCTGCTGCCCTTCACTACGTCATCATAGATTATGCCCAAAAGATCAGTTCTTGATCCTCTCATCGGATGGGTTATATCAATATCTGACCAATCAAGAAGTGGTTTCTCAAGTTGAGGGCTTCATGGAAAAGTTTCCGGATGGAGATCCTGCCCAACATTTAATAGAGGAGCTGCTCCTCCGTGCAGCGAAAAAGGCTGGAATGGATTTTCACGAGTTGCTGGACATCCCTCAAGGAGACAGGAGGAAGTACCATGATGATGTTACTGTTATGGTGATATCACTTGAAGGAAGAATCTGGAAATCGTCAGGGAAGTATCTGTGA 2196 0.4822 MALCNLFGCFKAAKTNEPQVILAETTEPLDETLGHSFCYVRSSPRFLSPTTHSDRFLSPSNSLRFSPSHEPLPRTRPDSAFRAISGASVSANSSVPKTVLQLHDIYDDVAAAGGGNIVNGFKSTSSFSALPLQPVPKGGERRASFLSGPIESGHSGPLDDGAAGEVPFSAPLGGLYVKRKRKKGIAGFRKAFRGNVSEKKRPWVVPVLNFVGRKEVPVVSEGKTEVKSESAVQWALGKAGEDRVHVVVSEEQGWLFVGIYDGFNGPDAPEFLMGHLYRAVYSELQGLFWEVDEVQETSPVVVDETEPENEGEVEHDSNSFQGSTKRVTFQADGNESRRRRLWEFLAEDDAEDGLDLSGSDRFAFSVDDALKVTKEGSAGSRRWLLLSKLKHGLSKHKEGHGRKLLPWNLGTEEKDKVEVENQAEEKPHGGDHGRKRKVGPVDHDLVLKAMSRALEMTELAYLDMTDKVIDTNPELALMGSCLLVVLMRDEDVYVMNVGDSRAIVAHYECKEVNSSKESGIKGDISMESIVEESLAPGESAVKLGQEMRLVALQLSTDHSTSIEEAIIRIKNEHPDDSHCIVNDRVKGRLKVTRAFGAGFLKQPKWNDVVLEMFRNEYIGTAPYISCCPSLRHHRLCPKDQFLILSSDGLYQYLTNQEVVSQVEGFMEKFPDGDPAQHLIEELLLRAAKKAGMDFHELLDIPQGDRRKYHDDVTVMVISLEGRIWKSSGKYL* 732
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g01947 731 MobiDBLite consensus disorder prediction 132 162 - -
Rops1g01947 731 SMART PP2C_4 225 717 IPR001932 -
Rops1g01947 731 MobiDBLite consensus disorder prediction 416 438 - -
Rops1g01947 731 CDD PP2Cc 442 719 IPR001932 -
Rops1g01947 731 Gene3D - 213 726 IPR036457 -
Rops1g01947 731 ProSiteProfiles PPM-type phosphatase domain profile. 225 719 IPR001932 -
Rops1g01947 731 MobiDBLite consensus disorder prediction 316 330 - -
Rops1g01947 731 Pfam Protein phosphatase 2C 552 687 IPR001932 -
Rops1g01947 731 SUPERFAMILY PP2C-like 237 720 IPR036457 -
Rops1g01947 731 MobiDBLite consensus disorder prediction 303 332 - -
Rops1g01947 731 MobiDBLite consensus disorder prediction 58 78 - -
Rops1g01947 731 PANTHER PROTEIN PHOSPHATASE 2C 225 718 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g01947 Rops-Chr1 39530576 39535945 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops1g01947 27 731 PP2C-type Phosphatase Gene Family AT2G35350 60.395 0.0 800
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g01947 - - gmx:100775371 1063.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops1g01947 1 39530576 39535945 Rops2g04374 2 79743168 79748780 PCT