Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g01929 ATGAATGGAGGAAAAGCTAAAGATGTTACTAGACTCACTGCTCTTGTGGTGCCTACTCACTTGGTCGATGCTCCTCTGCTAGTGACAGCGTTTTGTTCTTTACCAAAGAACCTCAAGCGGCTAAGGGAGAATCTTGAGTGCTCAAAAGAACAAGTGGACTCATCACTAGCTAGAACATCAATATCTGGGTTAGGTGGTCGGGTAGATGGTATTTACAGCTACGCTACATTTCGGAGAGCTGATGCTCATTTGAATTGTTTTGAAATTGAAAGTCATCCATACCACAAGATTCATCTCCAGGAGTCTGTTGCTGTGATTAAGAACAACATGCAAGAATCTTGGCAACCGCAGCCCGGAAACCCTAGCGATGTTTCCAACTTAATGGACGATTGGGTTAGAGTTTGTGATACCTGTGGGGATGTAGGGAGGGAGGACTTAATTGCTCCTTGTAGCAAGTGTACCGATGGTGCACAGCACACTTATTGTATGCGTGTTAAGCTGGACAAAGTTCCTGAAGATGATTGGATGTGTGAAGAGTGCATGCTGAGGGAAGGAACTGAGAAATTAATGCAATATAAAGTTGAAGAGGCTGCCAGAAGAAAAGGACGTCTACAATCTAGTAAAGGTTCAAAATTAAAATATAGATCTTCATATGCTATGAAAATTGGGAAAAATGGTTTAAGTTCTACATCTAGTTTATCAGCTAAGAGACATGGAGTCCCTTTAGAAGCTCAGTCAGAGAAAAAAGCCAGGGCTAATGACACAAGTGCTGTATCCCTCAAGTCATCCAAACCCTGCCACAACTCTCTACATAGTAAGGACTTCTCATGCAAGAAATCTGAAGGGATCAAAATGAAATCAATCAACGATATTGTTTATTCTTTTCCACAAAAGTCTTGCGATTCTCAAGGGAAAGAAAAGGTTCCTCATGCCACATCTAGTTTATCAGCTAAGAGACATGGAGTCCCTTTAGAAGCTCAGTCAGAGAAAAAAGCCAGGGCTAATGAAACAAGTGCTGTATCCCCCAAGTCATCCAAACCCTGCCACAACTCTCTACATAGTAAGGACTTCTCATGCAAGAAATCTGAAGGGATCAAAATGAAATCAATCAATGATATTGTTTATTCTTTTCCACAAAAGTCTTGTGATTCTCAAGGGAAAGAAAAGGTTCCTCATGCTTGTGGTGATAGAGAACATGTGAGCACCTTAGTTGTGTTAGGCCAAAAAGGAAGGGCTCTTGAAACAAGCCTTATATCTCACAAAGCATCCCATTCATGCAACCATTATCCACTTGGTGGGGAACCTCCATCCAAAAAGTTGGGGAAGGTGAAATTAAAGGCCGCTGGTAGTGTTACTTCCCTGAAGCAATCTTCTTATGGTGCTAAGAAGGCAAAGTTACCCTATTGTTTAGGTGATGGATCACCAAGATCGGGTTCACAAACCGAGATAGCACATGATAAATGCTCTCTGTTGAAGTCAAGTTCACCAAAAGCTGCAAATTTGAAACTTGAAGGATGGCCGGCAAAGGCTGGTTCTTTGCAAAAGGAGAAGGTTGAGAGAAATCCAGATTTTCATGATGATAAAAAGGGAAAAGATCCTAGAACTGCATCTGAATCTGCGTCATTATATAGTCTTAACACGGAGGAGTCAAATGCTACTTGTTCTGAGGTTCTCCTAGTAGATGCTTATGAGTTACGTGATTCTGCAATGTGCTTACTAGCTTCTGATTCTGGTGTAGCTGCAGAAAAGAGTGAAAAAGAAACTACTTCTTGTAGTGAAATTTTATTTTCAGGATCCAGCTTTTGTAAACTTGATGCTATTGAAAGTTCAGGACAATTGGGTCATAGATTACAGGCAAACAATCACAACACTCATAAAGGCCCGTACTGTCCAAATGAAAATAACAAAAATGAGAGCCAGCTAGCCAAACACCCCACAAAAGCTGCTACTGCTATGACCATATATAAATTATGCACTGGTCCCGGTTCTGATGAAAGGTCCCGCTTGAGAAGCTTGGCCCGGGTTGAGGCAGCAACTCTTTTACAGGGTGGTGTCATCCCAGAGTTTGATTATGCATGGCTAGGCAAATTTCAGATACACAACAATGAGGGGACTGCAAGGACTTGTGATGGGCTTCAAGCTCATTTATCAACTTGTGCTTCACCTAAAGTTCTTGAAGTGGTGTACAGGCTTCCTGAGACTATTATACTGGAGGAACTACCTCGCTTGAGGATGTGGCCATCTCAATTTATGGGAAGACAAGTCACTGAAGAAAATATCGGCCTTTACTTTTTTGCAAAAGATTTTGATAGCTATTATACATATTATAGAGGATTGATGAATCATATGACCAAAAATGATTTGGCTCTGAAAGGAAATTTGGATGGAGTTGAGCTTTTAATTTTTCCATCCAACATTCTGCCAGAGGAAATACAGCGTTGGAATCAAATGTTGTTCTTCTGGGGTGTATTCAAAGGACAAAAGGCGAATAACTCAACAAACACACCAGTCTTAAATTCGCTAAAGCCAGAGAATAGAGATACTGTGAAGATAAGGGCATTTGATCTCAATGCTTATCCTGAAGATGAAGATGAGGAGGCAGGAGTTGATGAAAGTCCTCAATTTGACAACATGGGTGGTACAGGTGACGGAATTTTGCTGGTTGGAGATAGCTCTAATGGTAAAGGAGGAGAGGCAAAGCCAGAGTGTGCGGTTTTAGATGTTAATCTTCCAATGCAGACTAGAAGTGCAACACCAGAAAATGTTGCTGTTGGGATTGAGGACAAATCAGCATCAGTCTCTCTTGCACAACCTTCAACTGTAATCCATCTTGACCAGCTTGATTGGCAACTTGCGGAAACTTTGTTTCTTCTCTCTAGGGACAGGTTTTGA 2892 0.4136 MNGGKAKDVTRLTALVVPTHLVDAPLLVTAFCSLPKNLKRLRENLECSKEQVDSSLARTSISGLGGRVDGIYSYATFRRADAHLNCFEIESHPYHKIHLQESVAVIKNNMQESWQPQPGNPSDVSNLMDDWVRVCDTCGDVGREDLIAPCSKCTDGAQHTYCMRVKLDKVPEDDWMCEECMLREGTEKLMQYKVEEAARRKGRLQSSKGSKLKYRSSYAMKIGKNGLSSTSSLSAKRHGVPLEAQSEKKARANDTSAVSLKSSKPCHNSLHSKDFSCKKSEGIKMKSINDIVYSFPQKSCDSQGKEKVPHATSSLSAKRHGVPLEAQSEKKARANETSAVSPKSSKPCHNSLHSKDFSCKKSEGIKMKSINDIVYSFPQKSCDSQGKEKVPHACGDREHVSTLVVLGQKGRALETSLISHKASHSCNHYPLGGEPPSKKLGKVKLKAAGSVTSLKQSSYGAKKAKLPYCLGDGSPRSGSQTEIAHDKCSLLKSSSPKAANLKLEGWPAKAGSLQKEKVERNPDFHDDKKGKDPRTASESASLYSLNTEESNATCSEVLLVDAYELRDSAMCLLASDSGVAAEKSEKETTSCSEILFSGSSFCKLDAIESSGQLGHRLQANNHNTHKGPYCPNENNKNESQLAKHPTKAATAMTIYKLCTGPGSDERSRLRSLARVEAATLLQGGVIPEFDYAWLGKFQIHNNEGTARTCDGLQAHLSTCASPKVLEVVYRLPETIILEELPRLRMWPSQFMGRQVTEENIGLYFFAKDFDSYYTYYRGLMNHMTKNDLALKGNLDGVELLIFPSNILPEEIQRWNQMLFFWGVFKGQKANNSTNTPVLNSLKPENRDTVKIRAFDLNAYPEDEDEEAGVDESPQFDNMGGTGDGILLVGDSSNGKGGEAKPECAVLDVNLPMQTRSATPENVAVGIEDKSASVSLAQPSTVIHLDQLDWQLAETLFLLSRDRF* 964
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g01929 963 MobiDBLite consensus disorder prediction 513 535 - -
Rops1g01929 963 PANTHER - 132 852 - -
Rops1g01929 963 MobiDBLite consensus disorder prediction 302 352 - -
Rops1g01929 963 MobiDBLite consensus disorder prediction 333 348 - -
Rops1g01929 963 MobiDBLite consensus disorder prediction 510 542 - -
Rops1g01929 963 SMART PHD_3 134 181 IPR001965 -
Rops1g01929 963 MobiDBLite consensus disorder prediction 251 266 - -
Rops1g01929 963 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 72 195 IPR013083 -
Rops1g01929 963 SUPERFAMILY FYVE/PHD zinc finger 123 185 IPR011011 -
Rops1g01929 963 MobiDBLite consensus disorder prediction 228 271 - -
Rops1g01929 963 Coils Coil 38 58 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g01929 Rops-Chr1 39321276 39328276 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops1g01929 134 203 C2H2 Transcription Factor Family AT3G01460 37.500 3.78e-07 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g01929 - - cam:101505946 674.855