Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Rops1g01922 | ATGCCGCAACTCATTTTCAACCCCTTGCTCTTTCTACTACTAATATGTTTAGTGTGCTCCAATGGAAGTGGTTTGTCCCTTCCAAGGGACTTTCAAATTCTGCTGCAGGTCAAGAACACCCAGCTTGAAGATAAAAACAAGAGTCTTAAAAACTGGGTGCCAAATAAGGAACACAACCCGTGTAACTGGACCGGCATTACCTGCGATGCACGAAACAAATCAGTTGTCTCAATTGACCTCTCCGAGACTGGAATTTACGGTGACTTCCCCTCTGGTTTTTGTCGTATTCGGACCCTTCAAAACCTTTCTCTTGCAGTGAACTTTCTTGGTAATTTTATCTCCTCAATTTCTATGCTTCCATGTTCACGGCTTCGCTTATTGAACCTCTCAGACAATTGCTTCGTGGGAGGGTTGCCGGAGTTCACACCGGAGTTTACTGAACTAACACAACTGGACCTCTCACAGAACAACTTTTCCGGTGATATTCCGGCGAGTTATGGCCAACTTCCACAACTAAGGGTGCTCATTTTGTCTGGAAATCTTCTCAGTGGAACGATCCCTCCCTTTTTAGGTAACCTCAGTGAGTTAACTCAATTGGCACTAGCTTACAATCCTCTAAAACCAGGAACTTTACCTTCCCAGATAGGAAACCTTTCAAAGCTGGAAATTCTGTTCCTAGCCAAAGTTAACCTCATAGGGAAGATACCGCACTCCATTGGGAACCTTGTTTCGCTTAAGAACTTGGATTTGTCTCATAACTCATTGTCAGGTAAGATCCCAGATAGCATTTCGGGCTTGAAAAGTGTGAAGCAAATTGAGCTATTCGAAAACCAGCTTTCTGGTGAATTGCCCCAAGGTTTAGGAAACCTCAGCAATTTGGTTATATTGGACATATCTCAGAATGGTCTCACCGGAAAATTGCCAGATACGGTTGCTTCATTGCATCTTTATGCTCTCAACTTGAACGACAACCTTCTCAGTGGAGAAGTTCCAGATAGTTTAGCTTCAAACCCAAATTTGCAGGAACTGAAACTCTTCAACAACAGCTTCACAGGGAAACTGCCACAAGATCTTGGGAGAAACTCTGCGTTATATGACTTTGATGTCTCAACCAATGATTTCATCGGGGGGTTACCAAAGTACCTCTGCCAAAGGAACAGTCTTCATCGTCTTGTCACATTCACAAATCGCTTCTCTGGAAATCTACCTGATCAGTATGGTGAGTGCCATTCTCTCGAATATGTTAGAATCGAGGACAACCAACTCTCTGGCCAGGTGCCACCGAGATTCTGGAACCTTCCACGGCTTCAGTTTCTGAAAATGGAAAACAACAGGTTCGAAGGTCCCCTTTCTGTTTCCATCTCTGGTGCCAGGGGAGTCACCAAACTCCTTTTATCCAATAACAGCTTCTCTGGTAAGTTCCCAAAGGGAATCTGTGAACTTGATCTGCTTGTGGAGATTGATGTCAGCAAGAACCGGTTCACTGGTGAAGTTCCCACTTGCATAACTAGATTGAGGAAGTTACAGAAGCTTAGGATGCAGGAAAACATGTTCACCGGTGTGATTCCTAGTGATGTAACCTCCTGGACTGAGTTGACCGAGTTAAACTTGTCGCATAACCGATTCTCAGGTTCAATTCCACCGAAACTCGGTGATTTGCCAGACTTAATATACCTTGACCTTGCAGGTAATTCGTTGACGGGGAAGATTCCGGTGGAGTTGACGAATCTAACTCTCAACCAGTTTAATGTCTCTGACAATGAACTTTATGGTGAGGTGCCTTCAGGTTTCAACCATGAAGTGTACTTGTCTGGTCTAATGGGAAACCCGGGTCTGTGTAGCCCAGTTATGAAAACCTTGCGTCCTTGTTCAAGACACAGAACCTTTTCTCTGCTTGCTACAATCCTTTTATCTGCTTGTGTTGTGCTCCTTCTGGGGTCTCTGTTGTGGTTCCTGAAGAGCAAGTCACATGCTTTTGTAGGAAAATCCAAGGGATCCTTTATAACAACAACGTTTCAAAGAGTGGGGTTCAATGAAGAAGACATAATCCCATTCTTAACTAATGAGAATGTGATTGGCAGGGGGGGTTCGGGTCAGGTGTACAGGGTGAAGCTCAAGACGGGGCAGACAGTGGCAGTGAAAAAGCTTTGGGGTGGTACACAAAAATTAGATACGGAATTGGTGTTCAAATCGGAGATTGAGACATTGGGTAGAAGAATTAGGCATGCTAATATTGTGAAACTGTTATTTTGTTGCAGTGCTGATGACTTCAGAATATTGGTGTATGAGTACATGGAGAATGGTAGCTTAGGTGATGTATTGCATGTGGACAAGTGTGTGGAGTTAATGGATTGGTCCAGGAGGTTCAAAATTGCTGTGGGTGCAGCTCAGGGGTTGGCTTATTTACACCATGATTGTGTGCCTGCTATTGTTCACAGGGATGTGAAGAGTAATAACATACTGCTGGACCATGAATTTATGCCTCGTGTGGCAGATTTTGGGCTGGCTAAGACATTGCAGCGTGAGCCTGGCGAGGGTGCTATGTCCAGGGTTGCTGGATCATACGGTTACATTGCTCCAGAGTATGCTTATACACTGAAAGTGACTGAGAAGAGCGATGTCTATAGTTTTGGTGTGGTGTTGATGGAATTGATCACTGGCAAGAGGCCAAATGATTCTTCCTTTGGTGAGAACAAAGATATAGTGAAGTGGGTCACTGAGACTGCTTTATCACCATCTCCTGAAGGAGGGAGTGGCAATATTGGAGGAGGTTCCAATTGTATTATGACCCAGATTGTGGATCCAAGATTGAACCCAGCCACTTGTGATTATGAAGAGGTTGAGAAGGTTTTAAATGTGGCTTTACTTTGCACCTCAGCGTTTCCCATTACTAGACCATCAATGAGAAGGGTGGTTGAATTGCTCAAGGACCATAAACTGGCTCGTCCCAAGTCTTGA | 2958 | 0.4429 | MPQLIFNPLLFLLLICLVCSNGSGLSLPRDFQILLQVKNTQLEDKNKSLKNWVPNKEHNPCNWTGITCDARNKSVVSIDLSETGIYGDFPSGFCRIRTLQNLSLAVNFLGNFISSISMLPCSRLRLLNLSDNCFVGGLPEFTPEFTELTQLDLSQNNFSGDIPASYGQLPQLRVLILSGNLLSGTIPPFLGNLSELTQLALAYNPLKPGTLPSQIGNLSKLEILFLAKVNLIGKIPHSIGNLVSLKNLDLSHNSLSGKIPDSISGLKSVKQIELFENQLSGELPQGLGNLSNLVILDISQNGLTGKLPDTVASLHLYALNLNDNLLSGEVPDSLASNPNLQELKLFNNSFTGKLPQDLGRNSALYDFDVSTNDFIGGLPKYLCQRNSLHRLVTFTNRFSGNLPDQYGECHSLEYVRIEDNQLSGQVPPRFWNLPRLQFLKMENNRFEGPLSVSISGARGVTKLLLSNNSFSGKFPKGICELDLLVEIDVSKNRFTGEVPTCITRLRKLQKLRMQENMFTGVIPSDVTSWTELTELNLSHNRFSGSIPPKLGDLPDLIYLDLAGNSLTGKIPVELTNLTLNQFNVSDNELYGEVPSGFNHEVYLSGLMGNPGLCSPVMKTLRPCSRHRTFSLLATILLSACVVLLLGSLLWFLKSKSHAFVGKSKGSFITTTFQRVGFNEEDIIPFLTNENVIGRGGSGQVYRVKLKTGQTVAVKKLWGGTQKLDTELVFKSEIETLGRRIRHANIVKLLFCCSADDFRILVYEYMENGSLGDVLHVDKCVELMDWSRRFKIAVGAAQGLAYLHHDCVPAIVHRDVKSNNILLDHEFMPRVADFGLAKTLQREPGEGAMSRVAGSYGYIAPEYAYTLKVTEKSDVYSFGVVLMELITGKRPNDSSFGENKDIVKWVTETALSPSPEGGSGNIGGGSNCIMTQIVDPRLNPATCDYEEVEKVLNVALLCTSAFPITRPSMRRVVELLKDHKLARPKS* | 986 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Rops1g01922 | 985 | FunFam | Receptor-like protein kinase HSL1 | 316 | 621 | - | - | |
Rops1g01922 | 985 | SUPERFAMILY | RNI-like | 74 | 374 | - | - | |
Rops1g01922 | 985 | FunFam | Leucine-rich receptor-like protein kinase family protein | 211 | 309 | - | - | |
Rops1g01922 | 985 | PRINTS | Leucine-rich repeat signature | 290 | 303 | - | - | |
Rops1g01922 | 985 | PRINTS | Leucine-rich repeat signature | 245 | 258 | - | - | |
Rops1g01922 | 985 | SMART | serkin_6 | 686 | 981 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Rops1g01922 | 985 | ProSiteProfiles | Leucine-rich repeat profile. | 244 | 267 | IPR001611 | GO:0005515 | |
Rops1g01922 | 985 | Gene3D | Ribonuclease Inhibitor | 25 | 207 | IPR032675 | - | |
Rops1g01922 | 985 | Gene3D | Phosphorylase Kinase; domain 1 | 677 | 764 | - | - | |
Rops1g01922 | 985 | FunFam | Leucine-rich repeat receptor-like protein kinase | 28 | 188 | - | - | |
Rops1g01922 | 985 | SUPERFAMILY | L domain-like | 314 | 631 | - | - | |
Rops1g01922 | 985 | PANTHER | LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED | 196 | 976 | - | - | |
Rops1g01922 | 985 | ProSiteProfiles | Protein kinase domain profile. | 686 | 981 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Rops1g01922 | 985 | Pfam | Leucine rich repeat | 147 | 206 | IPR001611 | GO:0005515 | |
Rops1g01922 | 985 | Pfam | Leucine rich repeat | 220 | 279 | IPR001611 | GO:0005515 | |
Rops1g01922 | 985 | FunFam | leucine-rich repeat receptor-like protein kinase TDR | 765 | 985 | - | - | |
Rops1g01922 | 985 | SMART | LRR_typ_2 | 169 | 192 | IPR003591 | - | |
Rops1g01922 | 985 | SMART | LRR_typ_2 | 242 | 266 | IPR003591 | - | |
Rops1g01922 | 985 | SMART | LRR_typ_2 | 529 | 553 | IPR003591 | - | |
Rops1g01922 | 985 | SMART | LRR_typ_2 | 193 | 218 | IPR003591 | - | |
Rops1g01922 | 985 | SMART | LRR_typ_2 | 290 | 314 | IPR003591 | - | |
Rops1g01922 | 985 | Pfam | Protein kinase domain | 688 | 896 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Rops1g01922 | 985 | ProSitePatterns | Protein kinases ATP-binding region signature. | 692 | 715 | IPR017441 | GO:0005524 | |
Rops1g01922 | 985 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 810 | 822 | IPR008271 | GO:0004672|GO:0006468 | |
Rops1g01922 | 985 | SUPERFAMILY | Protein kinase-like (PK-like) | 686 | 975 | IPR011009 | - | |
Rops1g01922 | 985 | Pfam | Leucine rich repeat N-terminal domain | 29 | 69 | IPR013210 | - | |
Rops1g01922 | 985 | Gene3D | Ribonuclease Inhibitor | 316 | 629 | IPR032675 | - | |
Rops1g01922 | 985 | Gene3D | Transferase(Phosphotransferase) domain 1 | 765 | 983 | - | - | |
Rops1g01922 | 985 | Gene3D | Ribonuclease Inhibitor | 208 | 315 | IPR032675 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Rops1g01922 | Rops-Chr1 | 39171068 | 39175142 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Rops1g01922 | 18 | 979 | Receptor kinase-like Gene Family | AT5G65710 | 57.406 | 0.0 | 1079 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-XI-1 | Rops1g01922 | Pkinase | 5.7e-44 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Rops1g01922 | - | - | gmx:100813889 | 1495.33 |