Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g01893 ATGGCTGCTGCTAGTGCTTCGAAGCCACCGATATGTTTACGAAGTCAAGAAGAAACTTGGCTTTCACGTGGCCCCATTTGTTCCCAATTCTCTAATTTTGGTTCAAGAGTGCAAACTGGAAGCCTCAGTTGTTCTCCTTTCAGGTTACATAGGAGCAAAAAGGTGGAGTTTTTTGTGAGAGGGTGTGGGTGTGATGGGGAGGAGGACTATGGTGTGACAAGGGAAGACCAAGATTTCGTGAAGGTTCTCCGTGAATCCCAGCCTTATATTTCTGTGCACAGGAGCAGAGTATTTGTTGTGGTCATTTCAGCAGAAATAGTTGCTAGCCCTTACTTGGATCCCATTCTCCAGAAGTTTCAATTTAAACCATGTTCCCCACAACCGTCGCCTCTGGGGACCCATTTCAGTAACCGAAAGAAGCGAATGTTAAAGAAATGCAATGTGTTGGATGGAGGAGTAAACGGGAACATGGAAGAGGAGAGCTACTATAACATCATGGAGGATAAGCAATTCGTTCGTTCGTTTCGTGAGGCATGGCCTTATTTATGGGCCTTTCGTGGCAGCACCTTTGTTGTCATAATTTCCGGTGAAATTGTCTCCAGTCCTTTATTGGATCCCATTCTCAAGGATATAGCTTTCCTTCATCACTTGGGAATCCGGTTTGTTCTTGTTCCGGGGACACATGTGCAAATAGACAAGCTTTTAACAGAGAGAGGGAGCCAACCTAAGTATGTTGGTAGATATAGAATAACTGATGATGAATCTCTAGAAGCTGCAATGGAAGCAGCTGGGGGATTAAGATTGATGATAGAAGCAAAACTATCTCCTGGACCTTCCATATGTAATATACGCCGACATGGTGACAATAGTCGTTGGCATGAAGTTGGTGTCAGTGTTGCCAGTGGTAACTTTCTTGCAGCCAAGAGAAGAGGGGTGGTCAATGGAATTGATTTTGGGTCAACTGGGGAAGTTAAAAAAGTAGATGCAACTCGCATGCGTGAGAGGCTTGATGCTGGTTGTATAGTTACTTTAACCAACTTGGGCTACTCCAGCTCTGGACAAGTGTTAAATTGCAACACCTATGAAGTTGCCACAGCTTGTGCCTTGGCTATAGGAGCGGATAAGCTAATATGCATAATAGATGGTCCAATACTTGATGAGAATGGACGTCTAATTCGTTTCTTGCCTCTTCAAGAAGCAGACATGTTAATTCGTAAACGAGCTGAACAAAGTGAAACAGCTGCTAACTATGTGAAAGCTGTTGATGAAGAAAGTTTCAACTCTCTTGAGCATAACAATTTTAACGGGACAGTCAAATCTCCACTTAATGGACAATGCCTTACACAATGGCATAATGCAACCTTCCATAATGGTGTTGGTTTTGAGAATGGAAATGGCTTAGAGTCTGGTGAGCAAGGTTTTGCTATTGGAGGTCAAGAGCGGCTAAGTCGAATGAATGGTTACCTGTCAGAATTGGCTGCTGCAGCTTTCGTTTGCAGAGGTGGGGTTCAAAGAGTTCACTTGTTGGATGCCACTATTAGTGGAATTTTGTTGTTGGAGTTGTTTAAAAGAGATGGCATGGGAACAATGGTGGCTAGTGACCTTTATGAAGGCACTCGGATGGCACAGATAAAAGATCTTGCTGGAATAAAACAAATTATTCAGCCTTTGGAGGCATCTGGCATATTGGTTAAGCGGACTGATGAAGAGCTGGCACAAACATTGGATCATTTCTTTGTTGTGGAAAGAGAAGGTCAAATAATTGCTTGTTCTGCCCTTTTTCCTTACTTTGAGGAGAAGTGTGGAGAGATTGCTGCCATTGCAGTATCTCCCGATTGTCGTGGCCAAGGACAGGGAGACAAATTGCTTGATTATATGGAGAATAAAGCATCATCTCTTGGATTGAATACGCTTTTCCTCCTTACAACACGTACAGCAGATTGGTTTGTTAGGCGTGGATTTTCAGAATGTTCAATTGATTATATTCCTGAAAAGAAAAGGAAAATGATCAATTTGTCCCGCAATTCTAAGTATTATATGAAGAAGCTTCTACCAAATAGAAGTGGAATTACTGTTGGTGGAAAACTTGCTTCAAATTAG 2100 0.4252 MAAASASKPPICLRSQEETWLSRGPICSQFSNFGSRVQTGSLSCSPFRLHRSKKVEFFVRGCGCDGEEDYGVTREDQDFVKVLRESQPYISVHRSRVFVVVISAEIVASPYLDPILQKFQFKPCSPQPSPLGTHFSNRKKRMLKKCNVLDGGVNGNMEEESYYNIMEDKQFVRSFREAWPYLWAFRGSTFVVIISGEIVSSPLLDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLTERGSQPKYVGRYRITDDESLEAAMEAAGGLRLMIEAKLSPGPSICNIRRHGDNSRWHEVGVSVASGNFLAAKRRGVVNGIDFGSTGEVKKVDATRMRERLDAGCIVTLTNLGYSSSGQVLNCNTYEVATACALAIGADKLICIIDGPILDENGRLIRFLPLQEADMLIRKRAEQSETAANYVKAVDEESFNSLEHNNFNGTVKSPLNGQCLTQWHNATFHNGVGFENGNGLESGEQGFAIGGQERLSRMNGYLSELAAAAFVCRGGVQRVHLLDATISGILLLELFKRDGMGTMVASDLYEGTRMAQIKDLAGIKQIIQPLEASGILVKRTDEELAQTLDHFFVVEREGQIIACSALFPYFEEKCGEIAAIAVSPDCRGQGQGDKLLDYMENKASSLGLNTLFLLTTRTADWFVRRGFSECSIDYIPEKKRKMINLSRNSKYYMKKLLPNRSGITVGGKLASN* 700
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g01893 699 Hamap Amino-acid acetyltransferase [argA]. 166 683 IPR010167 GO:0004042|GO:0005737|GO:0006526
Rops1g01893 699 Pfam Acetyltransferase (GNAT) family 574 642 IPR000182 GO:0016747
Rops1g01893 699 PANTHER AMINO-ACID ACETYLTRANSFERASE 158 691 IPR010167 GO:0004042|GO:0005737|GO:0006526
Rops1g01893 699 SUPERFAMILY Carbamate kinase-like 167 406 IPR036393 -
Rops1g01893 699 Pfam Amino acid kinase family 189 431 IPR001048 -
Rops1g01893 699 Gene3D - 169 536 IPR036393 -
Rops1g01893 699 CDD NAT_SF 578 640 - -
Rops1g01893 699 SUPERFAMILY Carbamate kinase-like 485 533 IPR036393 -
Rops1g01893 699 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 537 685 IPR000182 GO:0016747
Rops1g01893 699 Gene3D - 537 683 - -
Rops1g01893 699 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 540 686 IPR016181 -
Rops1g01893 699 CDD AAK_NAGS-ABP 170 531 IPR033719 -
Rops1g01893 699 NCBIfam amino-acid N-acetyltransferase 492 683 IPR010167 GO:0004042|GO:0005737|GO:0006526
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g01893 Rops-Chr1 38599691 38615668 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Rops1g01893 AA_kinase 5.3e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g01893 K14682 - gmx:100777694 929.087
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops1g01893 1 38599691 38615668 Rops2g04424 2 80915291 80921782 PCT