Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g01870 ATGGATGTGGAGTTACCTACTACGGTGGTTATAAGAGAGTTCGACCCAAATAAAGACAGAGAGAGAGTAGAAGCCGTTGAAAGGACATGCGAAGTTGGACCCAGTGACAAGCTTTCTCTCTTTACCGACATGCTCGGTGACCCAATTTGCAGGGTCCGCCACTCACCCGCTTTCCTCATGCTGGTGGCAGAGATGGGTGAAGAAATAATAGGAATGATAAGGGGTTGTATAAAAACCGTTACATGCGGTAAGAAACTCTTCAGAAATGGAAAGCAAAACAACAAAACTGACACTGCAAAACACGTCCCAGTATACACCAAAGTAGCATATATATTAGGCCTTCGTGTTTCTCCTAATCAAAGGAGAATGGGAATAGGGTTGAAGCTGGTAATGAGAATGGAAGCATGGTTCAGGGATAATGGTGCTGAATACTCGTACATGGCAACGGAAAACGACAATTTAGCATCCGTTAAACTCTTCACCGACAAATGCGGTTATTCAAAGTTCCGTACCCCGTCCATCCTTGTCAACCCCGTTTTCGCTCATAGAGTCAGGGTATCCTCAAACGTCACCATCATTCAACTCACTCCCTCCGACGCCGAAACCCTCTACCGCCGCCGTTTCGCCACCACGGAGTTCTTCCCACGCGACATTGACTCCGTCCTAAACAACAAACTCAACCTTGGCACTTTCCTCGCTGTCCCAAGTGGGTCCCACACCGCCGAATTATGGCCCGGCCCGGATCAGTTCCTCGCGGGCCCACCACGCTCCTGGGCCGTGCTCAGTTTATGGAACTCAAAAGAAGTTTTCACCCTCGAGGTGCGAGGCGCGTCGGGCGTGAAACGCACGTTGGCTAAAACGACGCGTGTTTTGGACCGGGCCTTGCCGTGGTTGCAATTACCATCGATTCCGGATTTGTTTAAACCGTTTGGGTTTCACTTTATGTATGGGCTTGGAGGGGAAGGCCCAGATGTGGTGAAGATGGTGAAGGCACTGTGTGGGTTCGCACATAACATGGCTATGGAACGAGGGTGTGGGGTGGTGGCTACTGAGGTTGCTGCACGCGAACCCTTGAGGTTTGGGATACCCCATTGGAAGATGCTGTCTTGTGAAGAGGATTTGTGGTGTGTTAAGAGGCTTGATGAAGATTACAGTGATGGCTCTGTTGGTGACTGGACCAAATCTCCACCTGGAATGTCCATTTTTGTTGACCCTAGAGAGATCTGA 1227 0.498 MDVELPTTVVIREFDPNKDRERVEAVERTCEVGPSDKLSLFTDMLGDPICRVRHSPAFLMLVAEMGEEIIGMIRGCIKTVTCGKKLFRNGKQNNKTDTAKHVPVYTKVAYILGLRVSPNQRRMGIGLKLVMRMEAWFRDNGAEYSYMATENDNLASVKLFTDKCGYSKFRTPSILVNPVFAHRVRVSSNVTIIQLTPSDAETLYRRRFATTEFFPRDIDSVLNNKLNLGTFLAVPSGSHTAELWPGPDQFLAGPPRSWAVLSLWNSKEVFTLEVRGASGVKRTLAKTTRVLDRALPWLQLPSIPDLFKPFGFHFMYGLGGEGPDVVKMVKALCGFAHNMAMERGCGVVATEVAAREPLRFGIPHWKMLSCEEDLWCVKRLDEDYSDGSVGDWTKSPPGMSIFVDPREI* 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g01870 408 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 9 168 IPR016181 -
Rops1g01870 408 FunFam Probable N-acetyltransferase HLS1-like 18 173 - -
Rops1g01870 408 Gene3D - 5 176 - -
Rops1g01870 408 Pfam Acetyltransferase (GNAT) family 54 166 IPR000182 GO:0016747
Rops1g01870 408 CDD NAT_SF 60 144 - -
Rops1g01870 408 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 9 185 IPR000182 GO:0016747
Rops1g01870 408 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 7 408 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g01870 Rops-Chr1 38260668 38262242 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Rops1g01870 Acetyltransf_1 5.5e-17 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g01870 - - gmx:100800613 697.967
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops1g01870 1 38260668 38262242 Rops1g01870 1 38260668 38262242 ECH
Rops1g01870 1 38260668 38262242 Rops2g04439 2 81172896 81174680 PCT