Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g01869 ATGGTAGACACGTTCAAAAAGTTTCCCCCACATTCTCCTCAAACCTTTTCTGATTCCCCATTTTACTTCGTCCGTCATTTTGCTGCGTCGGCAACAACTCCCTTCTCATACCTTCACCACTCTCATCCTCCACCACCACCGCCTGACACCCTGGTGCAGAGGATCGAAAAATCCACTCGCCTCCCCGACGCGACCTCTAAGGCTGGAATTTACGCTGATATCAATGTTATCCGCCCCAAGGAATATTGGGACTATGAGTCCCTCACTGTCCAGTGGGGATATTTCAAAGGTCCTGAGCTGCTTGTTGATCTTCAAGACTATGATTACTCTCTAGATTTATGGTCTCTCGGTTGTACGTTTGCTGGAATGGTACTTGTAACAGATGAATTAAATGCATATCTGAACAAGTATTGCATAGAGTTGGACCCGCAGCTTGCAGTGCTTGTTGGGAGGCATGGCCGGAAGCCATGGACAAAGTTCATTAATGTAGATAATCAACACTTGGCTGTTCCTGAGGCCGTTGACTTTGTTGACAAGTTACTGCAGTATGATCACCAAGAACGGCCCACTGCAAAAGAAGCTATGTTGGTTGGTTTCTATGCTTGGTCCTCCAGAAGATTGTGA 624 0.4663 MVDTFKKFPPHSPQTFSDSPFYFVRHFAASATTPFSYLHHSHPPPPPPDTLVQRIEKSTRLPDATSKAGIYADINVIRPKEYWDYESLTVQWGYFKGPELLVDLQDYDYSLDLWSLGCTFAGMVLVTDELNAYLNKYCIELDPQLAVLVGRHGRKPWTKFINVDNQHLAVPEAVDFVDKLLQYDHQERPTAKEAMLVGFYAWSSRRL* 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g01869 207 Pfam Protein kinase domain 94 195 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops1g01869 207 SUPERFAMILY Protein kinase-like (PK-like) 94 199 IPR011009 -
Rops1g01869 207 Gene3D Transferase(Phosphotransferase) domain 1 88 126 - -
Rops1g01869 207 Gene3D Transferase(Phosphotransferase) domain 1 127 195 - -
Rops1g01869 207 ProSiteProfiles Protein kinase domain profile. 1 200 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops1g01869 207 PANTHER CASEIN KINASE II SUBUNIT ALPHA 94 200 IPR045216 GO:0004674|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g01869 Rops-Chr1 38215174 38226133 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops1g01869 72 195 MAP Kinase Gene Family AT3G45640 25.180 8.50e-08 49.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CK2 Rops1g01869 Pkinase 4.6e-10 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g01869 K03097 - jre:109022073 186.808