Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g01851 ATGGCCCTCTGCAATGTATGTCTAGCGATAACGGAGATGAAGACGGAGGACCAGAAAAGTACTTACATAGTACATGTGGCCAAATCCAAAATGCCAGCAAGCTTCAAGCACCATTCAACCTGGTATGAATCAATTCTAAAATCAATATCTAATTCAGCAGAAATGCTCTACACCTATGACAAAGCGATGCATGGATTCTCAACAAGATTGACAGTTGAAGAAGTTCGATTGCTAAAGAGTCAAACGGGGATTCTAAAGGTGTTGCCAGACAAAATGTACAAGCTCCTCACAACTCGAACCCCACAATTCCTTGGGCTCGATAAAATTCCTGGCATGTTCGTCGATTCAAACACAAGTAGTGACATAATCATTGGAGTCCTCGACACTGGCATTTGGCCCGAAAGCAAGAGCTTCGACGATACCGGATATGGACCTATTCCTAGCAGTTGGAAAGGTAAATGTGAAGAAGGTACCAATTTCACAACCAAGAATTGTAATAAGAAATTGATTGGAGCCAGGTTCTATTCAAAGGGCCACGAGGCCTTGAAGGGTTCGCTCGATGAATCCAATGAATCTATATCCCCACGAGACGATGATGGGCATGGCACCCATACTGCGAGCACAGCTGCAGGGTCTGTAGTGAAAAATGCGAGCCTATTTGGCTATGCTGCCGGGATGGCACGTGGGATGGCCCCACGTGCTAGAGTGGCTATGTATAAGGTTTGTTGGGATGATTCTTGTGCCGTTTCTGACATACTGGCCGCAATGGATCAAGCCATCATCGACAATGTCAATATCCTTTCCTTGTCAATGGGAGGTGGAGAATATGACTATGACGTGGACGGCACCGCAATTGGAGCCTTTTCGGCAATGGAGCATGGGATTCTAGTCTCTTGCTCCGCAGGAAATGATGGTCCCAGTCCCTCTAGTCTTTCCAATGCAGCACCTTGGATTACCACCGTGGGAGCCGGGACACTTGATCGAGATTTTCCGGCATACGTGAGCCTCGGAAATGGACAAAATTATTCCGGAGTGTCCCTTTATAATGGCAAAGCTTTGCCCGATACTCGTGTGTCTTTCATATACGCAGGGAATGCGAGCAAAGGAAATGGTGGTGAGTTGTGTAAGCCAGATAGCTTGCTGCCAGAAAAGGTTAAGGGAAAGATCGTGTTGTGTGATCGTGGAGAATTTGCTAGGGTAGAGAAAGGGGAAGCAGTGAAATCTGCTGGCGGTTTGGGCATGGTGTTGGTCAACACGGTCGCTGACGGAGAAGATCTTGAAGCAGATGCCCATATTTTACCGGCAACTTTGGTGGGCTCGAAAGAAGGTGAAGCTATCAAGAAATATTTGTTTTCTAATCCAAAACCGACGGCTACGATAGTGTTTCAAGGAACAAAGGTTGGGATTGAGCCGTCACCTGTTGTTGCAACTTTCAGCTCTCGAGGCCCCAGCTCTATCACCCCAAAGGTATTAAAGCCTGATTTGATCGCACCAGGTGTCAACATTTTAGCAGCATTCACAAGGAATGTGGGTCCTACTAATTTGGATTCAGATAAAAGGCGCGTGGACTTCAATATCATGTCAGGCACGTCCATGTCATGCCCTCACGTGAGTGGACTAGCGGCTATGATCAAGTCAGCTCACCCAGATTGGAGCCCAGCTGCGATTAGATCTGCGCTAATGACCACGGCTTATACGGCTTACAAGAATGGTAAGCCATTGTTGGACGATGCTAACCAAAAACCAGCGACACCATTTGCTTTTGGCGCTGGACATGTGGACCCCATTTCTGCACTTAATCCAGGACTTATCTATGATTTGACAGTGGATGATTATCTAGATTTCCTCTGTGCGTTGAATTACACAGCTGATCAGATCGAAACTGTGGCGAGGAGAAAGTATCAATGTAACACATACAAACTTTACAGTGTAACAAACCTAAATTACCCTTCATTTGCAGTGGTGTTTGAACATGCATCAGGTGGCTACGGATCCAGTGCAAATGAGGTTAAATACATGCGGACCCTTACCAACGTGGGGGCTGCAGGAACGTACAAGGTTTCCGTTAGGTCAGATATCCCGTTCGTCAAGATCTCAGTAGAGCCGAAAGTGCTGAGTTTCAACAAAAATGAGAAAAAATCTTACGTGGTTACATTTATGGCATTAGGTCCGAAACCACATAATCCTCATGGTTTTGGATGTTTAGAATGGTCTAATGGAAAGATCGTTGTTAAAAGTCCTATTTCATTTAGTTGGGTTTAA 2262 0.4571 MALCNVCLAITEMKTEDQKSTYIVHVAKSKMPASFKHHSTWYESILKSISNSAEMLYTYDKAMHGFSTRLTVEEVRLLKSQTGILKVLPDKMYKLLTTRTPQFLGLDKIPGMFVDSNTSSDIIIGVLDTGIWPESKSFDDTGYGPIPSSWKGKCEEGTNFTTKNCNKKLIGARFYSKGHEALKGSLDESNESISPRDDDGHGTHTASTAAGSVVKNASLFGYAAGMARGMAPRARVAMYKVCWDDSCAVSDILAAMDQAIIDNVNILSLSMGGGEYDYDVDGTAIGAFSAMEHGILVSCSAGNDGPSPSSLSNAAPWITTVGAGTLDRDFPAYVSLGNGQNYSGVSLYNGKALPDTRVSFIYAGNASKGNGGELCKPDSLLPEKVKGKIVLCDRGEFARVEKGEAVKSAGGLGMVLVNTVADGEDLEADAHILPATLVGSKEGEAIKKYLFSNPKPTATIVFQGTKVGIEPSPVVATFSSRGPSSITPKVLKPDLIAPGVNILAAFTRNVGPTNLDSDKRRVDFNIMSGTSMSCPHVSGLAAMIKSAHPDWSPAAIRSALMTTAYTAYKNGKPLLDDANQKPATPFAFGAGHVDPISALNPGLIYDLTVDDYLDFLCALNYTADQIETVARRKYQCNTYKLYSVTNLNYPSFAVVFEHASGGYGSSANEVKYMRTLTNVGAAGTYKVSVRSDIPFVKISVEPKVLSFNKNEKKSYVVTFMALGPKPHNPHGFGCLEWSNGKIVVKSPISFSWV* 754
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g01851 753 SUPERFAMILY PA domain 380 439 IPR046450 -
Rops1g01851 753 FunFam subtilisin-like protease SBT1.5 327 467 - -
Rops1g01851 753 MobiDBLite consensus disorder prediction 185 203 - -
Rops1g01851 753 SUPERFAMILY Subtilisin-like 95 603 IPR036852 GO:0004252|GO:0006508
Rops1g01851 753 CDD Peptidases_S8_3 93 565 IPR034197 -
Rops1g01851 753 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 6 96 IPR037045 -
Rops1g01851 753 ProSiteProfiles Serine proteases, subtilase domain profile. 103 599 - -
Rops1g01851 753 Gene3D - 616 752 - -
Rops1g01851 753 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 22 749 IPR045051 -
Rops1g01851 753 FunFam Subtilisin-like protease SBT1.5 121 340 - -
Rops1g01851 753 ProSitePatterns Serine proteases, subtilase family, serine active site. 529 539 IPR023828 -
Rops1g01851 753 PRINTS Subtilisin serine protease family (S8) signature 528 544 IPR015500 -
Rops1g01851 753 PRINTS Subtilisin serine protease family (S8) signature 197 210 IPR015500 -
Rops1g01851 753 PRINTS Subtilisin serine protease family (S8) signature 119 138 IPR015500 -
Rops1g01851 753 MobiDBLite consensus disorder prediction 185 207 - -
Rops1g01851 753 Pfam Fibronectin type-III domain 646 749 IPR041469 -
Rops1g01851 753 Pfam Subtilase family 119 591 IPR000209 GO:0006508|GO:0008236
Rops1g01851 753 FunFam Subtilisin-like protease SBT1.9 10 96 - -
Rops1g01851 753 CDD PA_subtilisin_like 333 460 - -
Rops1g01851 753 Pfam Peptidase inhibitor I9 21 95 IPR010259 -
Rops1g01851 753 Gene3D Peptidase S8/S53 domain 121 612 IPR036852 GO:0004252|GO:0006508
Rops1g01851 753 Gene3D - 327 468 - -
Rops1g01851 753 Pfam PA domain 369 446 IPR003137 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g01851 Rops-Chr1 37917581 37919842 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops1g01851 6 752 Subtilisin-like Serine Gene Family AT5G67360 65.200 0.0 999
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g01851 - - gmx:100801866 1075.85