Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g01847 ATGGAGGACCAAAAGAGAACTTACATACTACATGTGGCCAAATCTGAAATGCCAACAAGCTTCAAGCACCATTCAATTTGGTATGAATCAATTCTGAAATCGATATCTGGCTCCGTAGAAATGCTCTACATCTATGACAATGCAATTCATGGATTCTCAACAAGATTAACAAGTGAAGAAGCCCGATTGTTGAAGAGTCAAATGGGGATTCTAAAGGTGTTGCCAGACCAAAAGTACAAGCTCCTCACAACTCGAACCCCACAATTCCTTGGGCTCGATAAAATCCCTAGCACGTTCCTCGAGTCAAACACAAGTAGTGACATAATCATCGGAGTCCTAGACACAGGCATTTGGCCCGAAAGCAAAAGCTTTGACGATACCGGATATGGACCCATTCCCAGCAGTTGGAAAGGCAAATGTGAAGAAGGTACCAATTTCAGAACCAAGAATTGTAATAAAAAATTGATTGGAGCCAGGTTCTATTCAAAGGGCCAAGAGGCCTTGATGGGTCCACTCGATGAATCCAACGAATCTATATCCCCACGAGATGATGATGGGCATGGCACCCATACCGCAAGCACGGCTGTAGGGTCTACGGTGAAAAATGCAAGCCTATTTGGTTATGCTTCCGGGATAGCACGTGGGATGGCCCCACGTGCCAGAATTGCTATGTACAAGGTTTGCTGGGATGAATCTTGTGCCCTTTCTGACATACTGGCCGCAATGGATCAGGCCATCGCTGACAACGTCAATATCCTTTCCTTGTCAATCGGAGGTGGAGCATATGACTACATCGAAGATAGCATCGCAATTGGAGCCTTTTCGGCAATGGAGCATGGAATTTTAGTCTCTTGCTCCGCAGGAAATGATGGTCCCGATTACTCTAGTATTACCAATGTAGCACCTTGGATTACCACCGTGGGAGCTGGGACACTCGATCGAGATTTCCCGGCATATGTTAGCCTAGGAAATGGGCAAAATTATTCTGGAGTGTCCCTTTATAGTGGCAAGGCTTTACCTAATACTCGTGTTTCGTTCATATATGCAGGAAATGCGAGTGAGGGATCTGTTGGTGAGTTTTGTTTTCCACGTGACTTGATTCCAGAAAAGATTAAGGGAAAGATCGTGTTGTGTGATCTTGGAGAAAATTCTAGGACAGAGAAAGGAGATACGGTGAAATCCGCTGGTGGTTTAGGCATGGTGTTGGCCAATGTGGACACCAACGGAGAGGAACTTGTGGCAGATCCCCATATTTTGCCAGCAATTTCCGTGGGCGTGAAAGCAGGTGAAGCTATCAAGAAGTACTTGTTTTCTGATCTGAAACCGACAGCTACGATTGTGTTTCAGGGAACAAAGGTTGGGATTAAGCCGTCACCAGTTGTTGCAGCGTTCAGCTCCAGAGGCCCTAATGGTATCACTCGAACCATATTGAAGCCTGATTTGATCGCACCAGGTGTCAACATCTTAGCGGCATATACAAGGAATGCAGGCCCCACTAATCTGGATTCGGATAATAGGCGTGTGGACTTCAACGTCATCTCTGGTACATCCATGTCATGCCCTCACGTGAGCGGGTTAGTGGCTTTTGTCAAGTTTGTTCACCCAAACTGGAGCCCAGCCGCGATTAGATCTGCGCTAATGACCACAGCTTATACGACTTACAAGAATGGTAAGCCATTACTGGACAGTGCTACCCAAAAATCAGCAACACCATTTGCTTTAGGTGCTGGACACGTGGATCCCATCCCTGCACTTGATCCAGGACTTGTCTATGATTTGACAGTGGATGATTATTTAAGCTTTCTCTGTGCGTTGAACTACACAGTCGATCAAATCGAAGTCGTGGCGAAGAGAAAGTATAAGTGTGACACAAACAAACACTACAGTGTAACGGATCTTAATTACCCTTCATTTGCTGTGGTGTTTAAACCAGTAGCAGATGGTGACGGTGCAACAGAGGTTAAATACACACGAACACTTACCAATGTGGGGGCCGTAGGAACGTACAAGGTATCCGTTAGGTCAGATATCCCATCAGTTAAGATTTCAGTGGAGCCAGAAATGTTGATTTTCAACAAAAATGAGAAAAAATCATATGCAGTTACGTTTACAGCATTAAGTCAAAAACAAGAAAATCTGGATGGTTTTGGACGTTTAGAATGGTCTAATGGAAAGATCATTGTTGGAAGTCCTATCTCATTTAGTTGGGATAACTATGAAAGCTCCAATAATAATTGA 2238 0.4459 MEDQKRTYILHVAKSEMPTSFKHHSIWYESILKSISGSVEMLYIYDNAIHGFSTRLTSEEARLLKSQMGILKVLPDQKYKLLTTRTPQFLGLDKIPSTFLESNTSSDIIIGVLDTGIWPESKSFDDTGYGPIPSSWKGKCEEGTNFRTKNCNKKLIGARFYSKGQEALMGPLDESNESISPRDDDGHGTHTASTAVGSTVKNASLFGYASGIARGMAPRARIAMYKVCWDESCALSDILAAMDQAIADNVNILSLSIGGGAYDYIEDSIAIGAFSAMEHGILVSCSAGNDGPDYSSITNVAPWITTVGAGTLDRDFPAYVSLGNGQNYSGVSLYSGKALPNTRVSFIYAGNASEGSVGEFCFPRDLIPEKIKGKIVLCDLGENSRTEKGDTVKSAGGLGMVLANVDTNGEELVADPHILPAISVGVKAGEAIKKYLFSDLKPTATIVFQGTKVGIKPSPVVAAFSSRGPNGITRTILKPDLIAPGVNILAAYTRNAGPTNLDSDNRRVDFNVISGTSMSCPHVSGLVAFVKFVHPNWSPAAIRSALMTTAYTTYKNGKPLLDSATQKSATPFALGAGHVDPIPALDPGLVYDLTVDDYLSFLCALNYTVDQIEVVAKRKYKCDTNKHYSVTDLNYPSFAVVFKPVADGDGATEVKYTRTLTNVGAVGTYKVSVRSDIPSVKISVEPEMLIFNKNEKKSYAVTFTALSQKQENLDGFGRLEWSNGKIIVGSPISFSWDNYESSNNN* 746
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g01847 745 MobiDBLite consensus disorder prediction 171 193 - -
Rops1g01847 745 FunFam subtilisin-like protease SBT1.5 313 453 - -
Rops1g01847 745 Pfam PA domain 351 432 IPR003137 -
Rops1g01847 745 SUPERFAMILY Subtilisin-like 81 589 IPR036852 GO:0004252|GO:0006508
Rops1g01847 745 CDD PA_subtilisin_like 319 446 - -
Rops1g01847 745 Gene3D - 602 736 - -
Rops1g01847 745 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 9 732 IPR045051 -
Rops1g01847 745 Pfam Fibronectin type-III domain 632 733 IPR041469 -
Rops1g01847 745 Pfam Peptidase inhibitor I9 7 81 IPR010259 -
Rops1g01847 745 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 1 82 IPR037045 -
Rops1g01847 745 Gene3D - 313 454 - -
Rops1g01847 745 PRINTS Subtilisin serine protease family (S8) signature 105 124 IPR015500 -
Rops1g01847 745 PRINTS Subtilisin serine protease family (S8) signature 514 530 IPR015500 -
Rops1g01847 745 PRINTS Subtilisin serine protease family (S8) signature 183 196 IPR015500 -
Rops1g01847 745 ProSiteProfiles Serine proteases, subtilase domain profile. 89 585 - -
Rops1g01847 745 ProSitePatterns Serine proteases, subtilase family, serine active site. 515 525 IPR023828 -
Rops1g01847 745 FunFam Subtilisin-like protease SBT1.9 1 82 - -
Rops1g01847 745 CDD Peptidases_S8_3 79 551 IPR034197 -
Rops1g01847 745 Pfam Subtilase family 105 563 IPR000209 GO:0006508|GO:0008236
Rops1g01847 745 Gene3D Peptidase S8/S53 domain 107 598 IPR036852 GO:0004252|GO:0006508
Rops1g01847 745 FunFam Subtilisin-like protease SBT1.5 107 326 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g01847 Rops-Chr1 37784845 37787082 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops1g01847 7 736 Subtilisin-like Serine Gene Family AT5G67360 66.257 0.0 998
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g01847 - - gmx:100801866 1067.76