Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g01799 ATGGCGTCGAAGCCTTCGCCGTCGCCCTCTTCTTCTAGATCAGAGCCTCCCGTCGATCCCTCCACCAAGAAAGTGGAGGATGCAAGTCCTACCGTAAAAGATGTGTTACTGGTTATTGATTCTTTAAAGACACAAGTTGCTGCTGAACGGGTTGTTTCAGTGAAGAAAAGAATGGAAGAGAATAGGCTGAAGCTGGTTGGTGTCACAAACCATCTCTGCAAAATGTCAATGGAGAGAAGGACCTGCAACATTGCCGATACAAATAGAAGTCTGGACCTACTGACTAAGAGGCAAAAAGATGCAATTGATATGCACAATGGTGTTAATGCGAGTAATGGTGAAAGGGAGAGCAATGGCTATCACGACGAAGATGGCCATGGTGGTTCTACAGCAGTTCTTCTAGGATCTAATGTTGCTGTAAAGAATGCTGTTCGTCCTATCAAGTTACCTGAAGTAAAAAGATTACCTCCTTACACCACGTGGATTTTTCTGGACAGAAATCAAAGAATGACAGAGGATCAGTCAGTTGTAGGTCGGAGGCGAATTTATTATGATCAAAATGGTGGAGAAGCACTTATTTGCAGTGACAGTGAGGAGGAAATAATAGAGGAGGAAGAGGAAAAAAGAGAATTTGTAGAATCAGAAGATTATATACTTCGTATGAGTGTCAAAGAATTTGGTTTACGTGATACTGTTCTGGAGTCGCTGGCTCAGTGTTTCTCTAGAAACACTAATGAAATCAAGGCAAGATATGAAACTCTTAGTAATGAAGACAATGCTGGTGGGGGTTCCAAGAATGAAGATACTGAAGAGAATTCTCAAAGTGGCAATTCTTTCCTGGAAAAGGATCTTGAAGCAGCTCTTGACTCTTTTGACAACCTCTTTTGCCGACGATGTCTTGTTTTTGATTGCAGATTACATGGATGTTCACAGGATCTTGTCTTCCCTGCTGAGAAGCAATCTTCATGGAACCCTCCTGATCCCGAAAATGCACCATGTGGGCCAAATTGTTTCCGATCGGTACTTAAGTCAGAAAGATTTGCCAAAGTTACCTCTTCTACTCAGGTTGATGTTGAAGACAAATGCTCTGGTGGTGCTTTATCTAGGAAAAAATCTTCTGCTAGAAGGCGGATAAAATGCAGCCAAAGTGAAAGTGCTTCATCTAATGCAAAAAACATATCTGAGAGTAGTGACTCAGAGAATGGTCCTGGACGGGATGCTGTTTCAGCCTCCCACTCAGCACCATCTAAAACTAAACCTGTGGGGAAAAGTGGAATTGGTAAGAGAAACAGTAAGCGAGTGGCAGAACGTGTTCTAGTTTGCATGCAAAAGCGGCAGAAGAAAACAGTAGCTTCCGATTCTGATTCCATTAGTGAAGCTCTTGACCGTTCATTGAATGATACGGTTACTGACCCACATGTCACGAGTGGTGAAGACAACATGAGGAAAGAAGAGTTTGTGGACGAGAACGTTTGTAAACAAGAATTCACAGATAATAAATCTTGGAAAGCTCTTGAAAAAGGGCTTTTAGAGAAAGGAATGGAGATTTTTGGTAGAAACAGCTGCTTAATAGCCAGGAATCTCTTAAATGGTCTAAAGACGTGCTGGGATGTTTTCCAATACATAAATTGTGAAGAAGGAAAGATGTCTGGTCCTTCTGGGGATGCTGTGAATTCTCTTGTGGAAGGCTATTCCAAGGGTAATAATGAAGTGAGACGAAGGTCAAGATTTTTACGTAGAAGAGGAAGAGTCCGTCGTTTAAAGTATACCTGGAAATCTGCTGCTTATCATTCAATCAGGAAAAGGATTACAGAGAGAAAGGATCAGCCCTGCCGCCAGTACAATCCATGTGGTTGCCAATCAGCTTGTGGAAAGCAGTGTCCTTGTCTTCAAAATGGAACCTGCTGTGAGAAGTACTGTGGATGCCCCAAGAGTTGCAAGAATAGATTTCGTGGCTGTCATTGTGCGAAGAGTCAATGCCGAAGTCGTCAATGTCCATGCTTTGCTGCAGATAGGGAATGTGATCCAGATGTTTGTAGGAATTGTTGGGTCAGTTGTGGCGATGGTACTCTTGGGATTCCTAGTCAAAGAGGGGATAATTATGAATGTAGAAACATGAAGCTTCTTCTCAAACAGCAGCAAAGGGTTCTTCTTGGAAGGTCCGATGTATCTGGCTGGGGAGCCTTCTTAAAGAATAGTGTTGGCAAGCATGAATATCTTGGAGAGTATACTGGAGAGTTAATTTCTCATAGGGAAGCAGATAAGCGAGGAAAGATATATGACCGTGAAAATTCATCTTTTCTCTTTAATCTGAATGATCAGTTTGTTCTTGATGCGTACCGAAAGGGTGATAAATTGAAGTTTGCAAACCATTCTCCCGATCCAAATTGCTATGCAAAGGTTATTATGGTTGCTGGAGATCATAGAGTAGGCATTTTTGCCAAGGAACGGATTTGTGCTGGGGAGGAACTGTTTTACGATTATCGTTATGAGCCCGATAGAGCTCCTGCCTGGGCTCGGAAGCCAGAGGCATCTGGATCAAAAAAAGAGGACGGTGCTCCTTCAAGTGGTCGTGCAAAGAAGCTTGCTTAA 2592 0.4263 MASKPSPSPSSSRSEPPVDPSTKKVEDASPTVKDVLLVIDSLKTQVAAERVVSVKKRMEENRLKLVGVTNHLCKMSMERRTCNIADTNRSLDLLTKRQKDAIDMHNGVNASNGERESNGYHDEDGHGGSTAVLLGSNVAVKNAVRPIKLPEVKRLPPYTTWIFLDRNQRMTEDQSVVGRRRIYYDQNGGEALICSDSEEEIIEEEEEKREFVESEDYILRMSVKEFGLRDTVLESLAQCFSRNTNEIKARYETLSNEDNAGGGSKNEDTEENSQSGNSFLEKDLEAALDSFDNLFCRRCLVFDCRLHGCSQDLVFPAEKQSSWNPPDPENAPCGPNCFRSVLKSERFAKVTSSTQVDVEDKCSGGALSRKKSSARRRIKCSQSESASSNAKNISESSDSENGPGRDAVSASHSAPSKTKPVGKSGIGKRNSKRVAERVLVCMQKRQKKTVASDSDSISEALDRSLNDTVTDPHVTSGEDNMRKEEFVDENVCKQEFTDNKSWKALEKGLLEKGMEIFGRNSCLIARNLLNGLKTCWDVFQYINCEEGKMSGPSGDAVNSLVEGYSKGNNEVRRRSRFLRRRGRVRRLKYTWKSAAYHSIRKRITERKDQPCRQYNPCGCQSACGKQCPCLQNGTCCEKYCGCPKSCKNRFRGCHCAKSQCRSRQCPCFAADRECDPDVCRNCWVSCGDGTLGIPSQRGDNYECRNMKLLLKQQQRVLLGRSDVSGWGAFLKNSVGKHEYLGEYTGELISHREADKRGKIYDRENSSFLFNLNDQFVLDAYRKGDKLKFANHSPDPNCYAKVIMVAGDHRVGIFAKERICAGEELFYDYRYEPDRAPAWARKPEASGSKKEDGAPSSGRAKKLA* 864
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g01799 863 Gene3D SET domain 614 831 IPR046341 -
Rops1g01799 863 MobiDBLite consensus disorder prediction 837 863 - -
Rops1g01799 863 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 1 863 IPR025778 GO:0031519
Rops1g01799 863 MobiDBLite consensus disorder prediction 361 430 - -
Rops1g01799 863 Pfam CXC domain 652 683 IPR041355 -
Rops1g01799 863 MobiDBLite consensus disorder prediction 837 856 - -
Rops1g01799 863 FunFam Putative histone-lysine N-methyltransferase EZH2 614 831 - -
Rops1g01799 863 Coils Coil 195 215 - -
Rops1g01799 863 SMART CXC_2 648 685 IPR033467 -
Rops1g01799 863 CDD SET_EZH 714 830 - -
Rops1g01799 863 ProSiteProfiles CXC domain profile. 600 699 IPR026489 -
Rops1g01799 863 SUPERFAMILY SET domain 588 834 IPR046341 -
Rops1g01799 863 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE E(Z) 28 861 IPR045318 GO:0006338|GO:0042054
Rops1g01799 863 SMART set_7 714 835 IPR001214 GO:0005515
Rops1g01799 863 ProSiteProfiles SET domain profile. 714 829 IPR001214 GO:0005515
Rops1g01799 863 SMART sant 207 257 IPR001005 -
Rops1g01799 863 SMART sant 498 548 IPR001005 -
Rops1g01799 863 Pfam SET domain 725 828 IPR001214 GO:0005515
Rops1g01799 863 MobiDBLite consensus disorder prediction 251 277 - -
Rops1g01799 863 MobiDBLite consensus disorder prediction 1 28 - -
Rops1g01799 863 MobiDBLite consensus disorder prediction 106 126 - -
Rops1g01799 863 MobiDBLite consensus disorder prediction 257 277 - -
Rops1g01799 863 MobiDBLite consensus disorder prediction 379 418 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g01799 Rops-Chr1 37164303 37174046 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops1g01799 703 832 C2H2 Transcription Factor Family AT2G23740 27.211 1.06e-09 60.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Rops1g01799 SET 8.4e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g01799 - K11430 gmx:100799832 1548.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops1g01799 1 37164303 37174046 Rops1g01799 1 37164303 37174046 ECH