Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g01772 ATGGAGATAGCTCAGGTCGGTGTCAGGACACGAGCTCGAGCAGCATTAGCCACGGAAGCTGCAAGTTCAGCTGCACGAACACCGAAGAGAAGGAAGATCAACAAAAGCAACGAAGAACCAAAACTCTCAACAGAATCAACAGCATTCGTTCACCTCAAGACTCAAAATAGGAGCAGGAGAGCTCCGGCAGTCAAACCGGAGACGGAGACGGAAGAACACTGCTCCGGCCCTACCTCCGATGAATCTCCGGCGTCTTGTTGTTCGAGCAACGGATCCATTGATGAGGAGAGGATCAAATCGTTAGATCTGGAGGTGGAGAGCGCGCAAGTTGAAACGTCGACGTGCAATTGCGGTGATGAAACTGAAAGGAGAGAGATGAGCTATTCCAGCGAGCTTCGAGAAAATTCGCAAGAGCTGGATTCTATGGAGGAGACCAATTCTCACCGTCCTATATCAACGGCGCAAAATATGCCAACGGAATCGGAGCTTGAAGAATTTTTCGCTGCCGCTGAGAAAGACATTCAGAAACGGTTTCAAGACAAGTATAATTATGATGTTGTGAAGGACGTGCCATTGGAAGGACGCTACGAGTGGGTTCAGTTGAAGCCATGA 612 0.4918 MEIAQVGVRTRARAALATEAASSAARTPKRRKINKSNEEPKLSTESTAFVHLKTQNRSRRAPAVKPETETEEHCSGPTSDESPASCCSSNGSIDEERIKSLDLEVESAQVETSTCNCGDETERREMSYSSELRENSQELDSMEETNSHRPISTAQNMPTESELEEFFAAAEKDIQKRFQDKYNYDVVKDVPLEGRYEWVQLKP* 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g01772 203 MobiDBLite consensus disorder prediction 146 160 - -
Rops1g01772 203 MobiDBLite consensus disorder prediction 117 145 - -
Rops1g01772 203 PIRSF CKI_KRP_plant 3 203 IPR044275 GO:0004861|GO:0045736|GO:0051726
Rops1g01772 203 MobiDBLite consensus disorder prediction 1 160 - -
Rops1g01772 203 PANTHER CYCLIN-DEPENDENT KINASE INHIBITOR 4-RELATED 5 202 IPR044275 GO:0004861|GO:0045736|GO:0051726
Rops1g01772 203 MobiDBLite consensus disorder prediction 60 76 - -
Rops1g01772 203 Gene3D p27 154 203 IPR044898 -
Rops1g01772 203 MobiDBLite consensus disorder prediction 77 94 - -
Rops1g01772 203 Pfam Cyclin-dependent kinase inhibitor 157 201 IPR003175 GO:0004861|GO:0005634|GO:0051726
Rops1g01772 203 MobiDBLite consensus disorder prediction 40 54 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g01772 Rops-Chr1 36752467 36754071 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops1g01772 158 203 Core Cell Cycle Gene Families AT1G49620 67.391 7.92e-19 79.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g01772 - - gmx:547743 227.639