Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g01756 ATGCAACCACACTTACAGCCACCAACCCAACAACATTCCAGAAGAAGGCCAGCTGCTACATTCTGGAATCCTCCAAAGACAGCTGCATCAAACCAACACACAAGGAGTCATGGTTGCCAAGAAGAGAACCATCTCTTTGAGGGTGATAGAGGCAAAAACGAAGTTGAGTTTCTCCACGCTTTTCTCTATAAATACAGATCTATGGCCAATGACACAAGGATTGCTGCTTCTCTCTTGCGCCTTCATTTCCATGATTGTTTCGTTAATGGATGTGATGGGTCAGTGCTACTCGATGATACTGACACTCTAAAGGGAGAGAAAAATGCACTGCCTAATAGAAATTCTATCAGAGGATTTGAGGTCATTGACACAATCAAATCTGCTTTAGAGAAGGCTTGTCCATCCACAGTGTCATGTGCTGATATACTTACTCTAGCAGCAAGAGAAGCTGTTTATCTGAGTAAGGGTCCATTTTGGGCAGTACCTCTTGGTCGTAGAGATGGCACAACAGCAAGTGAGAGCGAGGCAAATAACTTGCCATTACCTTTTGAACCTCTAGAAAACATCACTCCCAAGTTCATTTCCAAGGGTCTTGAAAAGAAGGATGTAGCAGTGCTCTCAGGTGCCCACACCTTTGGCTTTGCTCAATGCTACACATTCAAGCCAAGGCTCTTCGACTTTGGTGGCTCTGGTAAATCTGATCCAACACTTGATGCTTCACTTCTACAAAATTTGCAGAAACTATGCCCAAATCAAGCTGATTCTGACACCAATTTGGCTCCCTTGGATTCTGTCACTACCAACACATTTGATAACGAGTATTACAAAAATCTTGTAAGCAATTCGGGGCTACTTCAATCAGACCAAGCTCTTTTGGGTGATAAAACAACTGCTTACTATAGCAGGTTGCCTAGTCTGTTTTTCCAAGACTTTGCCGTATCTATAAAGAAAATGAGTCGCATAGGTGTACTTACAGGACAACAAGGAGAAATAAGGAAAAACTGTAGTGTGGTGAACTAG 1020 0.4275 MQPHLQPPTQQHSRRRPAATFWNPPKTAASNQHTRSHGCQEENHLFEGDRGKNEVEFLHAFLYKYRSMANDTRIAASLLRLHFHDCFVNGCDGSVLLDDTDTLKGEKNALPNRNSIRGFEVIDTIKSALEKACPSTVSCADILTLAAREAVYLSKGPFWAVPLGRRDGTTASESEANNLPLPFEPLENITPKFISKGLEKKDVAVLSGAHTFGFAQCYTFKPRLFDFGGSGKSDPTLDASLLQNLQKLCPNQADSDTNLAPLDSVTTNTFDNEYYKNLVSNSGLLQSDQALLGDKTTAYYSRLPSLFFQDFAVSIKKMSRIGVLTGQQGEIRKNCSVVN* 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g01756 339 MobiDBLite consensus disorder prediction 1 37 - -
Rops1g01756 339 Pfam Peroxidase 68 299 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops1g01756 339 Gene3D - 67 339 - -
Rops1g01756 339 MobiDBLite consensus disorder prediction 1 17 - -
Rops1g01756 339 Gene3D Peroxidase, domain 2 180 318 - -
Rops1g01756 339 PRINTS Plant peroxidase signature 117 130 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops1g01756 339 PRINTS Plant peroxidase signature 316 329 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops1g01756 339 PRINTS Plant peroxidase signature 155 170 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops1g01756 339 PRINTS Plant peroxidase signature 201 213 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops1g01756 339 PRINTS Plant peroxidase signature 277 294 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops1g01756 339 PRINTS Plant peroxidase signature 136 146 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops1g01756 339 PRINTS Plant peroxidase signature 77 97 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops1g01756 339 PRINTS Plant peroxidase signature 261 276 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops1g01756 339 ProSiteProfiles Plant heme peroxidase family profile. 68 339 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops1g01756 339 FunFam Peroxidase 60 188 - -
Rops1g01756 339 FunFam Peroxidase 180 318 - -
Rops1g01756 339 ProSitePatterns Peroxidases active site signature. 75 86 IPR019794 GO:0004601
Rops1g01756 339 CDD secretory_peroxidase 68 338 IPR033905 GO:0004601|GO:0042744
Rops1g01756 339 ProSitePatterns Peroxidases proximal heme-ligand signature. 202 212 IPR019793 -
Rops1g01756 339 SUPERFAMILY Heme-dependent peroxidases 67 339 IPR010255 GO:0004601|GO:0006979|GO:0020037
Rops1g01756 339 PRINTS Haem peroxidase superfamily signature 137 154 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops1g01756 339 PRINTS Haem peroxidase superfamily signature 75 89 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops1g01756 339 PRINTS Haem peroxidase superfamily signature 155 167 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops1g01756 339 PRINTS Haem peroxidase superfamily signature 202 217 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops1g01756 339 PRINTS Haem peroxidase superfamily signature 263 278 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops1g01756 339 PANTHER PEROXIDASE 72-RELATED 67 337 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g01756 Rops-Chr1 36438338 36440828 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops1g01756 65 335 Peroxidase AT1G49570 63.309 1.10e-120 350
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g01756 K00430 - gmx:100786765 469.159