Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g01730 ATGTCATTTTCGTTGTTCTCCACTCCTCAGCAACAGCCACAGCAACCGCAGCAACAGATGTTTCAACCGCAGCAGCAGCAGCAGCAATCTCCTTTCCAGCAGAGTAGTTTGTTCGCTCCGCAGCAGCAGCAACAGCAACAACAATTTCAACCGCAACAACAGCTGCAGCAACAGCAACAACAGCTGCAGCAACAGCAACAACAATTTCAACAGCAACAACAGCAGCAGCAGCAGCAACGACAACAACAGCAATTGTTTTTGTTCACTAACGATAGAACTCCCGCTAGTTACAGTACCAGTTGGTCTGATCTACATCCTGATTCCCAGAAGATTCTCCTCCAGATCGAGGAGCGGATATTGGAGTATAGGGATGAAAGCCAGAGACTAGATCAATGTAGTCGCCTTTATGATTCTTCTGTTTCCAACGATGGATTTGAGCTTGATGCAAGCCATATTGTTCAGGAACTTGGTGGAATTAGCACTGCCATGGAACGGCAGAAAACTTTGCTGCAGGAGCTGATGTCCACTGTTAAGGATATGTTACGCAACACAGAGGTTGCTGTTCGTTCCTTTATGATGCTACGTCCAAGGTTCCTTCATCCTAGTGGAGGTGCATCAAGTGCCACTGCCCCATCTCAGACTCCCGGAGTGAATACAGCACCTAGTTCGAGTAGCCAACCAACAACTACATCTATAGTGCCTGTTTTTGATTTCTACAGTGGTCTTCCAAAGAAACCATCACCCTTTTTACAGCAAACAGTTTTGAGATTTGAAAAGTATCTTGGTGAATGCCATCAGTGGATTGAAGAGTTGGAGCAGCTGCTTCTCTTAGACTCCGAGAGAAACGCTTCCAGTAATGGATCCTCATTATTACAATCTCTTCCCAAAGTCATGACAAATGTGCATGACTTTTTTGTTCATGTGGCTGCAAAGGTGGAGAACATTCACCAGTACATTGAATCTATGAAATCAGCATACCTAGCTGATCAGCGCCGCCGGGGTGAGGTGAATGATCCATTTCTAGAGGCTGATCGGCGAGAAACTGCACGACAAGAAGCTGCCTCAAAAAGAGTTCATCCAACGCTGCATTTACCTGCAAATTCACAACCCTCGACTCAAGTTGCTGGGTTGTTTTCCAGTTCAGGAACTCAAGGGGTATTGACTGCCCCACAGACATATGCAGCAACTTCATCTTCATCATTAGGAAGTGGTTTCTCTCTTTTTAGCACGCCATCTTCTGCTCCGTCGTCTTCTATGTCATCTTCTTTGTTTACAACACCTTCTACTCCTGCTCCAGGATCCTCTTGGTTTGCATCCTCTGGTGCTACACCTCAATCCTCACTTTTTGGATCTGCATCATCATCCTTACCTGGTCCTGCATCAACTCCCTCTCTCTTCAGTAATACTACTACATTGTTTAGTTCTACTCCAGCTGCAGGTTCACTCTTTTCAACTCCATTTGTTTCAGGTGCTGCAACAGGATCAGGGGCGAGCTTTGGAGCCGGATCGAAAAATCCACGACCTAAATCCAGAACTGCTCGACGCTAA 1548 0.4606 MSFSLFSTPQQQPQQPQQQMFQPQQQQQQSPFQQSSLFAPQQQQQQQQFQPQQQLQQQQQQLQQQQQQFQQQQQQQQQQRQQQQLFLFTNDRTPASYSTSWSDLHPDSQKILLQIEERILEYRDESQRLDQCSRLYDSSVSNDGFELDASHIVQELGGISTAMERQKTLLQELMSTVKDMLRNTEVAVRSFMMLRPRFLHPSGGASSATAPSQTPGVNTAPSSSSQPTTTSIVPVFDFYSGLPKKPSPFLQQTVLRFEKYLGECHQWIEELEQLLLLDSERNASSNGSSLLQSLPKVMTNVHDFFVHVAAKVENIHQYIESMKSAYLADQRRRGEVNDPFLEADRRETARQEAASKRVHPTLHLPANSQPSTQVAGLFSSSGTQGVLTAPQTYAATSSSSLGSGFSLFSTPSSAPSSSMSSSLFTTPSTPAPGSSWFASSGATPQSSLFGSASSSLPGPASTPSLFSNTTTLFSSTPAAGSLFSTPFVSGAATGSGASFGAGSKNPRPKSRTARR* 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g01730 515 MobiDBLite consensus disorder prediction 205 228 - -
Rops1g01730 515 MobiDBLite consensus disorder prediction 493 515 - -
Rops1g01730 515 MobiDBLite consensus disorder prediction 345 377 - -
Rops1g01730 515 MobiDBLite consensus disorder prediction 202 228 - -
Rops1g01730 515 MobiDBLite consensus disorder prediction 1 48 - -
Rops1g01730 515 Coils Coil 52 82 - -
Rops1g01730 515 Coils Coil 163 183 - -
Rops1g01730 515 PANTHER NUCLEOPORIN P58/P45 NUCLEOPORIN-LIKE PROTEIN 1 6 506 IPR024882 GO:0005643|GO:0006913|GO:0008139|GO:0017056
Rops1g01730 515 Gene3D - 245 335 - -
Rops1g01730 515 MobiDBLite consensus disorder prediction 362 377 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops1g01730 85 515 NAC Transcription Factor Family AT4G37130 64.155 0.0 528
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g01730 K14307 - gmx:100776992 662.914
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops1g01730 1 36114165 36118941 Rops1g01730 1 36114165 36118941 ECH