Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g01727 ATGGGCGCTATCTCTGCTACTCAACCATCCAATTTAAAAAAAGCCCAAAATGAGTTGGACACTCATATTGGGAAGGACAGGAAGGTGGAAGAATCTGACATAAAGAACTTAGTCTACCTCCAAGCCATTGTCAAGGAAACACTGCGCCTCTATCCACCAAATGCCATTATCAGCCTTCGTGCAACCATGGATGACTGCACTTTTTCATGTGGTTATCAGAGTCCTGCTGGTACACACGATTTGATTGTGAATGCTAGGAAGATCCTACAGGATGGTCGTGTTTGGCCTGATCCTCATGATTTCAAGCCTGAAAGGTTCTAG 321 0.4455 MGAISATQPSNLKKAQNELDTHIGKDRKVEESDIKNLVYLQAIVKETLRLYPPNAIISLRATMDDCTFSCGYQSPAGTHDLIVNARKILQDGRVWPDPHDFKPERF* 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g01727 106 Pfam Cytochrome P450 6 106 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g01727 106 Gene3D Cytochrome P450 5 106 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g01727 106 PANTHER CYTOCHROME P450 82C3-RELATED 8 106 - -
Rops1g01727 106 PRINTS E-class P450 group IV signature 37 53 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g01727 106 PRINTS E-class P450 group IV signature 89 106 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g01727 106 SUPERFAMILY Cytochrome P450 6 106 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g01727 Rops-Chr1 36085215 36085535 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops1g01727 12 106 Cytochrome P450 AT4G31940 58.947 1.36e-32 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g01727 - - gmx:106794123 155.992