Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g01703 ATGGAAGCTCAACTATCCTTCATTGTTATTACCTCCTTTCTCTTCTTCTTGTTGCATTGGCTTGCAAAATATTACAAGCCAAAAACCAGTCTCTCTCATAAACTGCCCCCAGGTCCAAGGAAGTTACCTCTCATTGGAAACCTGCATCAACTAGCAGTTGCAGGATCTCTTCCTCATCATGCTCTCAGACAACTTGCCCATAAATATGGACCTCTCATGTACCTTCAACTTGGTGAAATTGCTGCAGTGGTTGTCTCCTCCTCCAAGATGGCAAAGGAAATAATGAAAACCCATGATGTTGCTTTTGCAAATAGGCCACAACTACTTTCTCCTCAAATTTTGGCCTATGGAGCAACAGATATTGCTTTTTCTCCATATGGTGATTATTGGAGACAAATGAGGAAGATATGTGTGTTAGAGCTTCTAAGTACCAAAAGGGTTCAGTCTTTCTCTTATATTAGAGAAGATGAGACAGCAAAATTCATTAAAACAATTCAGTCATTTGCAGGCTCACCAATCAATCTTACTAGTAGAATTTTTTCATTGGTAAGTTCTACTGTTTCCAGGGCTGCTTTTGGTGACAAATCTGAGCACCAAGATGAGTTTGTGTCTTTGGTCAGAAAAGCAATAGCACTGACCGGAGGATTTGAACTGGCTGATTTGTTTCCTTCATTCAAAGTCATACATGTACTAACAGGGGTGAAACCAATGTTGGAGAAATTTCACAAGCGTGCAGACAAAATCTTGGAGAACATTGTCAGGAAGCATCAAGAAAAGCAAGCAAGAGCAAAAGAAGGTGAAGGAGAGCATGAAGATCTTGTTGATGTTCTTTTGAGAATCCAACAAAGTGGCAGCCTTGACATCCAAATAACAACCAGAAATATCAAAGCTGTGATTTGGGACGTATTTGCCGCTGGCACTGATACCTCATCAACAACAATAGAGTGGGCCATGTCAGAAATGATGAGAAACCCAAGAGTGAGGGAGAAGGCACAAGCCGAGATAAGACAAGCATTCAAAGGAAAGGAAATAATCAATGAAACTGATCTAGAGGAGCTTAGTTACTTCAAGTCAGTGATCAAAGAAACATTGAGGTTACACCCACCCTCTCCTTTGTTGATCCCTAGAGAATGCACTGAATTAACCAACATTGATGGGTATGAAATACCAATAAAGACTAAAGTCATGATAAACGTTTGGGCAATTGGAAGAGATCCCCAATATTGGACTGATGCTGAGAGGTTTGTCCCAGAGAGGTTTGATGGTAGTTATATAGATTACAAAGGGAATAACTTTGAGTATATTCCTTTTGGGGCAGGAAGGAGAATGTGTCCAGGCATGACATTTGGTTTAGCTAGTGTTATGCTTCCTCTGGCTGTATTACTCTATCACTTCAACTGGGAACTCCCAAATGAGATGAAGCCTGAGGATTTGGATATGACTGAGCATTTTGGAATGGCAGTTGGGAAGAAAAGCGAGTTGTGTTTGATTCCCACTGTTTATGATCTCACTTCTTGA 1518 0.4058 MEAQLSFIVITSFLFFLLHWLAKYYKPKTSLSHKLPPGPRKLPLIGNLHQLAVAGSLPHHALRQLAHKYGPLMYLQLGEIAAVVVSSSKMAKEIMKTHDVAFANRPQLLSPQILAYGATDIAFSPYGDYWRQMRKICVLELLSTKRVQSFSYIREDETAKFIKTIQSFAGSPINLTSRIFSLVSSTVSRAAFGDKSEHQDEFVSLVRKAIALTGGFELADLFPSFKVIHVLTGVKPMLEKFHKRADKILENIVRKHQEKQARAKEGEGEHEDLVDVLLRIQQSGSLDIQITTRNIKAVIWDVFAAGTDTSSTTIEWAMSEMMRNPRVREKAQAEIRQAFKGKEIINETDLEELSYFKSVIKETLRLHPPSPLLIPRECTELTNIDGYEIPIKTKVMINVWAIGRDPQYWTDAERFVPERFDGSYIDYKGNNFEYIPFGAGRRMCPGMTFGLASVMLPLAVLLYHFNWELPNEMKPEDLDMTEHFGMAVGKKSELCLIPTVYDLTS* 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g01703 505 CDD CYP71-like 68 494 - -
Rops1g01703 505 PANTHER OS08G0105600 PROTEIN 60 501 - -
Rops1g01703 505 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 437 446 IPR017972 GO:0005506|GO:0016705
Rops1g01703 505 FunFam Cytochrome P450 71D8 28 498 - -
Rops1g01703 505 SUPERFAMILY Cytochrome P450 36 497 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g01703 505 PRINTS P450 superfamily signature 444 455 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g01703 505 PRINTS P450 superfamily signature 358 369 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g01703 505 PRINTS P450 superfamily signature 435 444 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g01703 505 PRINTS P450 superfamily signature 305 322 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g01703 505 Pfam Cytochrome P450 36 486 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g01703 505 PRINTS E-class P450 group I signature 90 111 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g01703 505 PRINTS E-class P450 group I signature 398 422 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g01703 505 PRINTS E-class P450 group I signature 314 340 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g01703 505 PRINTS E-class P450 group I signature 294 311 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g01703 505 PRINTS E-class P450 group I signature 357 375 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g01703 505 PRINTS E-class P450 group I signature 434 444 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g01703 505 PRINTS E-class P450 group I signature 66 85 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g01703 505 PRINTS E-class P450 group I signature 182 200 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g01703 505 PRINTS E-class P450 group I signature 444 467 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g01703 505 Gene3D Cytochrome P450 29 499 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g01703 Rops-Chr1 35726256 35728956 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops1g01703 5 501 Cytochrome P450 AT3G26300 43.478 4.79e-145 424
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g01703 - K15472 gmx:100783298 778.474