Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g01701 ATGGCTCTCTTCTTTCTTCCCTCCCGTTCTCAGAGTCTTTTCCTTGTACTCACTTTGTTTTTCACTAATATAGCAGCTCAATCGCCACAGATAAGTAGAACAAATTTTTCATGCCCTGTGGATTCACCTCCTCCTTGTGAAACATATGTGACATACATTGCCCAGTCTCCAAATTTTTTGAGTCTTATAAACATATCTGATATATTTGATACCAGTCCTTTATCCATTGCAAGAGCCAGTAACCTAGAGGCTGAGGATGACAAGCTGATTCCAGGCCAAGTCTTACTGGTACCAGTAACTTGTGGTTGCACTGGAAAACGCTCTTTCGCCAACATCTCCTATGAAATCAAGCTAGGTGATAGCTACATCTTTGTTGCAACCGGTTCATTCGAGAATCTCACCAGTTGGCATGAAATGACAGATGTAAACCCCGATCTAAATCCAAATCTGTTGCCACCAGGCATCAAAATAGTAGTCCCTTTATTCTGCAAGTGCCCTTCAAAGAACCAGTTGGACAAAGGGATAAAGTATCTGATTACTTATGTGTGGCAGCCCCATGACAATGTTTCCCTTGTAAGTGCCAAGTTTGGTGCTTCACCAGCGGACATATTGACTGAAAACAACTATGGTCAAAACTTCACTGCTGCAACCAACCTTCCAGTTTTGATCCCAGTGACACGGTTGCCTGATATTACTCAACCTATTTCAAATGGAAGAACAAGAAGCATTCATCTGCCGGTTATCATCAGTATTACCCTGGGATGCACACTTCTGATTGCAGTTTTAACGGTATCACCGGTATATGTATACTGTACGAAAAGGAAGGGTTTGAATAAGAGTCCTTCGTTGGCTGAGACAGCAGATAAGTTACTTTCAGGAGTTTCAGGCTATGTAAGTAAGCCAACCGTGTATGAAATTGATGCCATCATGGAAGCTACCATGAACCTCAGTGACCAGTGGAAGATAGGAGAATCAGTGTACAAGGCCAATATACAAGGTCGAGTTTTAGCAGTTAAAAAATTCAAGGAAGATGCCGCTGAGGAGCTGAAAATTTTGCAGAAGGTAAATCATGGAAATCTGGTGAAATTAATGGGTGTCTCGTCAGACAATGATGGAAACTGTTTCCTGGTTTATGAATATGCTGAAAATGGGTCTCTTGATGAGTGGCTGTTCTCCAAGTCTTCAGAAATCTCAAACTCCCTTACATGGTCTCAAAGGATAAGCATAGCAGTGGATGTTGCTGTGGGTCTGCAATACATGCATGAGCATACTTATCCAAGGATAGTCCACAGGGACATCACAACAAGTAATATCCTTCTTGACTCCAACTTTAAGGCCAAGATATCAAATTTCTCCATGGCAGGAACTTCAACGAACCCTATGATGCCAAAAATAGATGTCTTCGCTTTTGGGGTGGTTCTGATAGAGTTGCTCACTGGCAAGAAAGCCATAACAACCAAAGAAAATGGTGAGGTGGTTATGCTGTGGAAGGATATTCGCAAGATCTTCGATCAAGAAGAGAATAGAGAGGAGAGGCTCCAAAGATGGATGGATCCTAAGTTGGAGGGCTTTTATCCTATAGATAATGCTCTCAGCTTGGCCTCCTTGGCAGTGAATTGCACTGCAGATAAGTCTTTGTCAAGACCAACCATGGAAGATATTGTTCTTAGCCTCTCCCTTCTCACTCAACCATCTCCCACGACATTGGAGAGATCTTTGACTTCTGGGTTAGACATAGAAGCTACTTCCATAGCAGCTCGTTGA 1764 0.4246 MALFFLPSRSQSLFLVLTLFFTNIAAQSPQISRTNFSCPVDSPPPCETYVTYIAQSPNFLSLINISDIFDTSPLSIARASNLEAEDDKLIPGQVLLVPVTCGCTGKRSFANISYEIKLGDSYIFVATGSFENLTSWHEMTDVNPDLNPNLLPPGIKIVVPLFCKCPSKNQLDKGIKYLITYVWQPHDNVSLVSAKFGASPADILTENNYGQNFTAATNLPVLIPVTRLPDITQPISNGRTRSIHLPVIISITLGCTLLIAVLTVSPVYVYCTKRKGLNKSPSLAETADKLLSGVSGYVSKPTVYEIDAIMEATMNLSDQWKIGESVYKANIQGRVLAVKKFKEDAAEELKILQKVNHGNLVKLMGVSSDNDGNCFLVYEYAENGSLDEWLFSKSSEISNSLTWSQRISIAVDVAVGLQYMHEHTYPRIVHRDITTSNILLDSNFKAKISNFSMAGTSTNPMMPKIDVFAFGVVLIELLTGKKAITTKENGEVVMLWKDIRKIFDQEENREERLQRWMDPKLEGFYPIDNALSLASLAVNCTADKSLSRPTMEDIVLSLSLLTQPSPTTLERSLTSGLDIEATSIAAR* 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g01701 587 Pfam LysM domain 62 98 IPR018392 -
Rops1g01701 587 ProSitePatterns Tyrosine protein kinases specific active-site signature. 428 440 IPR008266 GO:0004672|GO:0006468
Rops1g01701 587 ProSiteProfiles Protein kinase domain profile. 284 561 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops1g01701 587 Gene3D Phosphorylase Kinase; domain 1 292 380 - -
Rops1g01701 587 SUPERFAMILY Protein kinase-like (PK-like) 313 558 IPR011009 -
Rops1g01701 587 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 12 565 - -
Rops1g01701 587 Pfam Protein tyrosine and serine/threonine kinase 342 457 IPR001245 GO:0004672|GO:0006468
Rops1g01701 587 Gene3D Transferase(Phosphotransferase) domain 1 460 570 - -
Rops1g01701 587 Gene3D Transferase(Phosphotransferase) domain 1 381 459 - -
Rops1g01701 587 FunFam Os07g0541700 protein 381 464 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g01701 Rops-Chr1 35719593 35721356 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops1g01701 32 561 Receptor kinase-like Gene Family AT3G21630 30.900 5.83e-71 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Rops1g01701 PK_Tyr_Ser-Thr 3.1e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g01701 - - gmx:100301877 908.286