Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Rops1g01701 | ATGGCTCTCTTCTTTCTTCCCTCCCGTTCTCAGAGTCTTTTCCTTGTACTCACTTTGTTTTTCACTAATATAGCAGCTCAATCGCCACAGATAAGTAGAACAAATTTTTCATGCCCTGTGGATTCACCTCCTCCTTGTGAAACATATGTGACATACATTGCCCAGTCTCCAAATTTTTTGAGTCTTATAAACATATCTGATATATTTGATACCAGTCCTTTATCCATTGCAAGAGCCAGTAACCTAGAGGCTGAGGATGACAAGCTGATTCCAGGCCAAGTCTTACTGGTACCAGTAACTTGTGGTTGCACTGGAAAACGCTCTTTCGCCAACATCTCCTATGAAATCAAGCTAGGTGATAGCTACATCTTTGTTGCAACCGGTTCATTCGAGAATCTCACCAGTTGGCATGAAATGACAGATGTAAACCCCGATCTAAATCCAAATCTGTTGCCACCAGGCATCAAAATAGTAGTCCCTTTATTCTGCAAGTGCCCTTCAAAGAACCAGTTGGACAAAGGGATAAAGTATCTGATTACTTATGTGTGGCAGCCCCATGACAATGTTTCCCTTGTAAGTGCCAAGTTTGGTGCTTCACCAGCGGACATATTGACTGAAAACAACTATGGTCAAAACTTCACTGCTGCAACCAACCTTCCAGTTTTGATCCCAGTGACACGGTTGCCTGATATTACTCAACCTATTTCAAATGGAAGAACAAGAAGCATTCATCTGCCGGTTATCATCAGTATTACCCTGGGATGCACACTTCTGATTGCAGTTTTAACGGTATCACCGGTATATGTATACTGTACGAAAAGGAAGGGTTTGAATAAGAGTCCTTCGTTGGCTGAGACAGCAGATAAGTTACTTTCAGGAGTTTCAGGCTATGTAAGTAAGCCAACCGTGTATGAAATTGATGCCATCATGGAAGCTACCATGAACCTCAGTGACCAGTGGAAGATAGGAGAATCAGTGTACAAGGCCAATATACAAGGTCGAGTTTTAGCAGTTAAAAAATTCAAGGAAGATGCCGCTGAGGAGCTGAAAATTTTGCAGAAGGTAAATCATGGAAATCTGGTGAAATTAATGGGTGTCTCGTCAGACAATGATGGAAACTGTTTCCTGGTTTATGAATATGCTGAAAATGGGTCTCTTGATGAGTGGCTGTTCTCCAAGTCTTCAGAAATCTCAAACTCCCTTACATGGTCTCAAAGGATAAGCATAGCAGTGGATGTTGCTGTGGGTCTGCAATACATGCATGAGCATACTTATCCAAGGATAGTCCACAGGGACATCACAACAAGTAATATCCTTCTTGACTCCAACTTTAAGGCCAAGATATCAAATTTCTCCATGGCAGGAACTTCAACGAACCCTATGATGCCAAAAATAGATGTCTTCGCTTTTGGGGTGGTTCTGATAGAGTTGCTCACTGGCAAGAAAGCCATAACAACCAAAGAAAATGGTGAGGTGGTTATGCTGTGGAAGGATATTCGCAAGATCTTCGATCAAGAAGAGAATAGAGAGGAGAGGCTCCAAAGATGGATGGATCCTAAGTTGGAGGGCTTTTATCCTATAGATAATGCTCTCAGCTTGGCCTCCTTGGCAGTGAATTGCACTGCAGATAAGTCTTTGTCAAGACCAACCATGGAAGATATTGTTCTTAGCCTCTCCCTTCTCACTCAACCATCTCCCACGACATTGGAGAGATCTTTGACTTCTGGGTTAGACATAGAAGCTACTTCCATAGCAGCTCGTTGA | 1764 | 0.4246 | MALFFLPSRSQSLFLVLTLFFTNIAAQSPQISRTNFSCPVDSPPPCETYVTYIAQSPNFLSLINISDIFDTSPLSIARASNLEAEDDKLIPGQVLLVPVTCGCTGKRSFANISYEIKLGDSYIFVATGSFENLTSWHEMTDVNPDLNPNLLPPGIKIVVPLFCKCPSKNQLDKGIKYLITYVWQPHDNVSLVSAKFGASPADILTENNYGQNFTAATNLPVLIPVTRLPDITQPISNGRTRSIHLPVIISITLGCTLLIAVLTVSPVYVYCTKRKGLNKSPSLAETADKLLSGVSGYVSKPTVYEIDAIMEATMNLSDQWKIGESVYKANIQGRVLAVKKFKEDAAEELKILQKVNHGNLVKLMGVSSDNDGNCFLVYEYAENGSLDEWLFSKSSEISNSLTWSQRISIAVDVAVGLQYMHEHTYPRIVHRDITTSNILLDSNFKAKISNFSMAGTSTNPMMPKIDVFAFGVVLIELLTGKKAITTKENGEVVMLWKDIRKIFDQEENREERLQRWMDPKLEGFYPIDNALSLASLAVNCTADKSLSRPTMEDIVLSLSLLTQPSPTTLERSLTSGLDIEATSIAAR* | 588 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Rops1g01701 | 587 | Pfam | LysM domain | 62 | 98 | IPR018392 | - | |
Rops1g01701 | 587 | ProSitePatterns | Tyrosine protein kinases specific active-site signature. | 428 | 440 | IPR008266 | GO:0004672|GO:0006468 | |
Rops1g01701 | 587 | ProSiteProfiles | Protein kinase domain profile. | 284 | 561 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Rops1g01701 | 587 | Gene3D | Phosphorylase Kinase; domain 1 | 292 | 380 | - | - | |
Rops1g01701 | 587 | SUPERFAMILY | Protein kinase-like (PK-like) | 313 | 558 | IPR011009 | - | |
Rops1g01701 | 587 | PANTHER | LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED | 12 | 565 | - | - | |
Rops1g01701 | 587 | Pfam | Protein tyrosine and serine/threonine kinase | 342 | 457 | IPR001245 | GO:0004672|GO:0006468 | |
Rops1g01701 | 587 | Gene3D | Transferase(Phosphotransferase) domain 1 | 460 | 570 | - | - | |
Rops1g01701 | 587 | Gene3D | Transferase(Phosphotransferase) domain 1 | 381 | 459 | - | - | |
Rops1g01701 | 587 | FunFam | Os07g0541700 protein | 381 | 464 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Rops1g01701 | Rops-Chr1 | 35719593 | 35721356 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Rops1g01701 | 32 | 561 | Receptor kinase-like Gene Family | AT3G21630 | 30.900 | 5.83e-71 | 238 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LysM | Rops1g01701 | PK_Tyr_Ser-Thr | 3.1e-23 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Rops1g01701 | - | - | gmx:100301877 | 908.286 |