Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Rops1g01700 | ATGCATCTCTTTCCCTTCATCTCTGTCTTCATTTTCACCCTATTGATCAGCAACTTCTCTATCATTCTGGGACAGCAACCTTATATTGGTTTAGCCACAAATGCATGCCCTCGAAAGGGTAACTCAAAATCTATCCGTGGTTACACTTGTAATGGTGCAAATCACAGTTGCCAAGCTTACCTTACCTTCAGATCTCAACCCATTTACAGTTCTGTTTCCACAATATCAGCTTTGTTGGGTTCTGACCCATCCCAGCTTGCTGAAATAAACTCAGTTTCCCTGAATGACACCTTTGAATCAAACAAGTTGGTGATTGTTCCTGTCAAGTGCTCCTGTGCAGGTGAGTATTATCAAGCAAACACATCCTATGTATTCCAGAATACAGACACCTACTTTTTGATTGCCAACAACACTTTTGAGGGTCTCTCAACTTGTCAAGCTTTGATGCGTGAAAACCACAATCCTAGAGATATATACCCTGGTAGAGAACTCACAGTTCCTCTTAGATGTGCTTGTCCCACAAAGAATCAAACTGAGAAAGGTGTCAGGTACCTCTTGAGTTACCTTGTAAACTGGGGTGATTCTGTTTCACTTGTTAGTGAGAGATTTGGTGTCAGAGCCAACACCACTCTTGAAGCTAATACCCTTACTATGACAAAAGCCATCATCTATCCCTTTACCACACTTCTAGTGCCACTTCATGATAAACCTTCAAGTTCTCAAACCCTTTCGCCAGCTAGACCATCTCCCTCATCCTCACCTTCATCTTCTTCCACAAATCAAAGATCAAGCAAAACTTGGGTGTATGTAATTGTTGGAGTAGTTGTTGGAGTTATCGCCTTAATATTAGTTCTCTGTGCTGTCATTTTCTTCACATGTTATCACAAGGGTAAAAAGAAAGATGATTCGGTGATTGTGTCCAAGAGTTTTGAGGCTATTGAGAAACCACAAGGGAAGGAAATTGAGAAAGAAGATGGAAAAAACTTGTCAGAGATCATATCTGGAATAGCTCAATCATTCAAAGTGTATGGTTTTGAGGAACTACAGCGTGCAACAGATAATTTTAGTCCAAGTTGTTGGATTAAAGGATCTGTTTACCGTGGTGTTATTAAAGGTGATTTGGGTGCAATTAAGAAGAAAGAAGGTGATGTGTCAAAAGAGATACAAATACTGAACAAAGCCAACCATTCTAATATTATACGCCTCTCTGGGGTCAGCTTCAATGAGGGTCATTGGTACCTTGTTTATGAGTATGCCGCTAATGGAGCCTTGTGCGATTGGATCTACTTCAACAACGTGGATGGGAAGTTTTTGAATTGGAAGCAAAGAATACAGATTGCATTGGATGTAGCCACAGGAGTTGACCATCTTCATAGTTTCACTTCTCCTCCTCATATCCATAAAGATCTAAAGATAAGTAACATTCTTTTGGACAATGATTTCAGGGCAAAGGTTGCAAACTTAAGCCTTGCAAGGTCCATGGAAGGAGTGGATGAGCAATTTCTTGCAACAAGGCATATTGTTGGGACAAGAGGTTACATGGCTCCTGAGTATTTGGAAAATGGTATTGTATCTACAAAGCTTGATGTTTATGCATTTGGGGTGTTGATGTTGGAAATCCTCACTGGAAAAGAGGTTGCTGCTATGTTAGATGAAGATAATAAGAATTTGTCAAATGTTTTAAGTGCCATACTTGATGAGGAAAGTGGCAAAGAGAGGTTGAAGGAGTTTATGGATCCTTCTCTGCAAGAAAATTATCCATTAAAACTTGCTATGTTTATGGTTGAAATGAGTGATAATTGTATAAAGAAAGATCCAGCAAGTCGCCCTGCCATGAATGAGATTGTAACATCTCTGTCCAAAACCCTGAACTCTACATTGAGTTGGGAAAATTCAGTGAACGTTTCAGGATACCACTGTTTTAGCAACATTTCTTGA | 1938 | 0.3973 | MHLFPFISVFIFTLLISNFSIILGQQPYIGLATNACPRKGNSKSIRGYTCNGANHSCQAYLTFRSQPIYSSVSTISALLGSDPSQLAEINSVSLNDTFESNKLVIVPVKCSCAGEYYQANTSYVFQNTDTYFLIANNTFEGLSTCQALMRENHNPRDIYPGRELTVPLRCACPTKNQTEKGVRYLLSYLVNWGDSVSLVSERFGVRANTTLEANTLTMTKAIIYPFTTLLVPLHDKPSSSQTLSPARPSPSSSPSSSSTNQRSSKTWVYVIVGVVVGVIALILVLCAVIFFTCYHKGKKKDDSVIVSKSFEAIEKPQGKEIEKEDGKNLSEIISGIAQSFKVYGFEELQRATDNFSPSCWIKGSVYRGVIKGDLGAIKKKEGDVSKEIQILNKANHSNIIRLSGVSFNEGHWYLVYEYAANGALCDWIYFNNVDGKFLNWKQRIQIALDVATGVDHLHSFTSPPHIHKDLKISNILLDNDFRAKVANLSLARSMEGVDEQFLATRHIVGTRGYMAPEYLENGIVSTKLDVYAFGVLMLEILTGKEVAAMLDEDNKNLSNVLSAILDEESGKERLKEFMDPSLQENYPLKLAMFMVEMSDNCIKKDPASRPAMNEIVTSLSKTLNSTLSWENSVNVSGYHCFSNIS* | 646 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Rops1g01700 | 645 | ProSiteProfiles | Protein kinase domain profile. | 299 | 623 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Rops1g01700 | 645 | SUPERFAMILY | Protein kinase-like (PK-like) | 338 | 619 | IPR011009 | - | |
Rops1g01700 | 645 | Pfam | LysM domain | 188 | 232 | IPR018392 | - | |
Rops1g01700 | 645 | Gene3D | Transferase(Phosphotransferase) domain 1 | 420 | 636 | - | - | |
Rops1g01700 | 645 | SMART | serkin_6 | 360 | 623 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Rops1g01700 | 645 | Gene3D | Phosphorylase Kinase; domain 1 | 320 | 418 | - | - | |
Rops1g01700 | 645 | PANTHER | LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED | 6 | 632 | - | - | |
Rops1g01700 | 645 | MobiDBLite | consensus disorder prediction | 237 | 261 | - | - | |
Rops1g01700 | 645 | FunFam | PTI1-like tyrosine-protein kinase 3 | 419 | 633 | - | - | |
Rops1g01700 | 645 | SMART | LysM_2 | 187 | 232 | IPR018392 | - | |
Rops1g01700 | 645 | SMART | LysM_2 | 122 | 167 | IPR018392 | - | |
Rops1g01700 | 645 | Pfam | Protein kinase domain | 378 | 617 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Rops1g01700 | Rops-Chr1 | 35713765 | 35715860 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Rops1g01700 | 1 | 632 | Receptor kinase-like Gene Family | AT2G23770 | 43.789 | 1.81e-169 | 495 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LysM | Rops1g01700 | Pkinase | 2.8e-37 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Rops1g01700 | - | - | gmx:100815842 | 943.34 |