Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g01689 ATGGAGAAGGGTGCTGGCAGGGTCTTGAATGGACAATGGTGGAAGAGAGCACGTGGGGGTGGGGGTCCACACAGCTTAGATACTTCTTACTCTAGCAATAGCCCTATATCTGGCAACAACACTTCCTCCTTAATTTCTCTTTGGGTCTTGCTCTGTGGTGCTGGTTTTGTCCTCTTTGTTGTCCTTGCCATAAAGCCCTTGCTTGTAGTTATGGCTAGGCGTTCCCCAGAAGTTGGTATAATTGTGCCCAAAGATGGTCCCTTTGTTGGGGTGTTGATTGAGAAGATAGAAGACCTGGTATATGGGCTTTTCATGCCACTCTATTTTGCTTCTAATGATCCGCCATGGACGCGAGTTTGGTGGCCTTTGTTTGTCTCTGACTTGGACTTTCCCTCTTTCTTTGGTTTTTCAATCTCACGCTCACATCTCATGGTTCTCAGTCGAACTCCAAAATCCAAATCTCCAATCCCCACCACCACCACACATTCTCCTTCTCAATCTCAAACCATGAAAAAGGCACAGATTTTTGGCGTGTCTCTCTCGCTCATTCTTATTAATCTGGCTGCTATTATGGAGCGCGCCGATGAAAATCTTCTTCCATCTGTCTACAAAGAAGTTAGTGAAACTTTTAATGCTGGGCCCTCTGATCTGGGTTACCTCACGTTTATAAGGAACTTTGTTCAGGGACTGTCATCTCCTCTGGCTGGTATACTTGTTATTAACTATGATCGCCCAACAATTCTTGCTATGGGCACTTTCTGCTGGGCTTTATCTACAGCTGCAGTGGGTGCTTGCCATGATTTTCTGCAGGTTGCATTCTGGAGAGCAATAAATGGCTTTGGTTTGGCAATTGTGATTCCAGCACTCCAGTCTTTCATTGCTGATAGCTACATGGATGGAGTGAGAGGAACTGGATTTGGAATACTAAGCCTTATTGGTACTTTGGGGGGCATAGGAGGTGGTGTTTTGGCTACTGTCATGGCTGGCCAGCAGTTTTGGGGCATACAAGGATGGCGATGTGCCTTCATTTTGATGGCTGCTTTGAGTGCATTAATTGGAATCCTTGTTTTACTCTATGTGGTTGACCCAAGAAAAAGATTTACCACCACTCGTGATGCAAGTGAGAGTTCTGACAGGGATGACTCTATCTATAAAGGCAATGCTAGTGCAGCGTCAATTTGGATGAACTCTTGGGCAGCCACAAAATCTGTGATCAAATTGCAAACATTTCAAATAATTGTCTTGCAGGGCATTATCGGGTCACTACCATGGACTGCCATGGTGTTCTTCACAATGTGGTTCGAACTAATTGGTTTTGATAATAATACTTCAGCAACCCTCCTTAGTCTTTTTGCTATTGGATGTGCTATTGGCTCCTTCATTGGTGGATCAATAGCTGATCAACTGTCACGAATCTACCCGCATTCTGGTCGTATAATGTGTGCACAGTTCAGTGCCTTTATGGGCATTCCATTTTCATGGTTTCTTCTTAAGGTGATTCCTCAGTCAGTAAGTAGTTTTCTTTCCTTTTCAGTCACCCTCTTTTTAATGGGTCTAACTATCAGCTGGAATGCTACGGCTGCAAATGGCCCTATGTTCGCTGAGGTAGTCCCTGTCAAACACCGGACCATGATTTATGCATTTGATCGAGCTTTTGAAGGCTCATTTTCTTCTATAGCGGCTCCCATGGTTGGGATTCTCTCTGAGAAAATGTTTGGCTACAACTCAAAGTCTGTTGATCCCATCAAAGGATCTTCACCAGAGGCTCTTGCCTTGTCAAAGGGCCTTCTTTCAATGATGGCAATTCCATTTGGATTGTGCTGTTTGTGTTACACTCCACTATATTATATATTTAAGAAGGACCGTGAAAATGCTAGAATGCTCGCCATCAAAGAGGAGGAGATGACGTGA 1911 0.4427 MEKGAGRVLNGQWWKRARGGGGPHSLDTSYSSNSPISGNNTSSLISLWVLLCGAGFVLFVVLAIKPLLVVMARRSPEVGIIVPKDGPFVGVLIEKIEDLVYGLFMPLYFASNDPPWTRVWWPLFVSDLDFPSFFGFSISRSHLMVLSRTPKSKSPIPTTTTHSPSQSQTMKKAQIFGVSLSLILINLAAIMERADENLLPSVYKEVSETFNAGPSDLGYLTFIRNFVQGLSSPLAGILVINYDRPTILAMGTFCWALSTAAVGACHDFLQVAFWRAINGFGLAIVIPALQSFIADSYMDGVRGTGFGILSLIGTLGGIGGGVLATVMAGQQFWGIQGWRCAFILMAALSALIGILVLLYVVDPRKRFTTTRDASESSDRDDSIYKGNASAASIWMNSWAATKSVIKLQTFQIIVLQGIIGSLPWTAMVFFTMWFELIGFDNNTSATLLSLFAIGCAIGSFIGGSIADQLSRIYPHSGRIMCAQFSAFMGIPFSWFLLKVIPQSVSSFLSFSVTLFLMGLTISWNATAANGPMFAEVVPVKHRTMIYAFDRAFEGSFSSIAAPMVGILSEKMFGYNSKSVDPIKGSSPEALALSKGLLSMMAIPFGLCCLCYTPLYYIFKKDRENARMLAIKEEEMT* 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g01689 636 SUPERFAMILY MFS general substrate transporter 176 624 IPR036259 -
Rops1g01689 636 CDD MFS_spinster_like 182 611 IPR044770 -
Rops1g01689 636 MobiDBLite consensus disorder prediction 1 34 - -
Rops1g01689 636 ProSiteProfiles Major facilitator superfamily (MFS) profile. 181 623 IPR020846 GO:0022857
Rops1g01689 636 PANTHER SPINSTER 179 631 IPR044770 -
Rops1g01689 636 Gene3D MFS general substrate transporter like domains 176 370 IPR036259 -
Rops1g01689 636 Gene3D MFS general substrate transporter like domains 403 634 IPR036259 -
Rops1g01689 636 Pfam Major Facilitator Superfamily 187 554 IPR011701 GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g01689 Rops-Chr1 35548623 35557596 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops1g01689 36 112 Antiporter Super Family AT3G17630 46.018 1.35e-21 97.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g01689 - - gmx:100812646 833.172