Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g01688 ATGACCGGCGGTGGGTCCTCCGGGAGGTTGCCGACGTGGAAAGAGAGAGAGAACAATAAGAGGAGAGAGAGAAGAAGAAGAGCGATTGCTGCTAAGATCTATACTGGTCTTAGAGCTCAAGGGAACTACAAGCTTCCCAAACACTGTGATAACAACGAGGTCTTGAAAGCTCTTTGTGCTGAAGCTGGTTGGATCGTAGAAGACGATGGCACTACCTATCGAAAGGGATGTAAGAGACCAATACCAACTGAGATTGGAGGCACTCCACCAAATATGAGTGCTTGTTCTTCCCTTCAGCCAAGTCCACAATCCTCATCATTCCCTAGTCCAGTGCCATCTTACCATGCTAGCCCAACTTCATCTTCTTTCCCAAGCCCCTCTCGTATTGATGGAAACCCCTCTGCTTTTCTTCTTCCATTCATCCGCAACATAACTTCCATACCCACAAATCTTCCACCTCTCAGGATATCTAACAGTGCCCCTGTAACCCCACCTCTTTCTTCTCCCAGAAGTTCAAAACGCAAAGCAGATTTTGAATCCCTCTCAAATTCTTCCCTTAACTCCTTCCGCCACCCTCTTTTTGCTATTTCTGCCCCATCAAGTCCCTCACGTCGTCACCATGTGGCCACTTCCACCATTCCAGAATGTGATGAGTCTGATGCTTCCACTGTGGATTCTGGTAGATGGGTTACTTTTCATACAACAGGTGCTGCTCCTCCTTCACCTACCTTTAATCTTGTGAAACCAGCGATCCAGAAGATTACCACTCCCCAGGATTCCATGGATATGAATGAAGGCATGCAATGGGGTTCAGGTGCTGAGAGAGGCAGAGGATCAGATTTTGACTTTGAGAATGGGAGGGTGAAGCCTTGGGAGGGTGAGAGAATCCATGAGGTTGGAATGGATGATTTGGAGCTTACTCTAGGGTGTGGAAAGGCCTAA 942 0.4777 MTGGGSSGRLPTWKERENNKRRERRRRAIAAKIYTGLRAQGNYKLPKHCDNNEVLKALCAEAGWIVEDDGTTYRKGCKRPIPTEIGGTPPNMSACSSLQPSPQSSSFPSPVPSYHASPTSSSFPSPSRIDGNPSAFLLPFIRNITSIPTNLPPLRISNSAPVTPPLSSPRSSKRKADFESLSNSSLNSFRHPLFAISAPSSPSRRHHVATSTIPECDESDASTVDSGRWVTFHTTGAAPPSPTFNLVKPAIQKITTPQDSMDMNEGMQWGSGAERGRGSDFDFENGRVKPWEGERIHEVGMDDLELTLGCGKA* 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g01688 313 MobiDBLite consensus disorder prediction 151 179 - -
Rops1g01688 313 MobiDBLite consensus disorder prediction 197 221 - -
Rops1g01688 313 PANTHER BES1/BZR1 HOMOLOG PROTEIN 3-RELATED 1 310 IPR033264 GO:0003700|GO:0006351|GO:0009742
Rops1g01688 313 MobiDBLite consensus disorder prediction 151 170 - -
Rops1g01688 313 MobiDBLite consensus disorder prediction 89 128 - -
Rops1g01688 313 MobiDBLite consensus disorder prediction 79 128 - -
Rops1g01688 313 Pfam BES1/BZR1 plant transcription factor, N-terminal 6 131 IPR008540 -
Rops1g01688 313 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g01688 Rops-Chr1 35541205 35542975 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops1g01688 9 313 BZR Transcription Factor Family AT1G75080 58.154 6.14e-102 300
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BES1 Rops1g01688 BES1_N 2.9e-63 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g01688 K14503 - gmx:100795837 452.981