Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g01682 ATGGCGAAGGGATGTGCACAGCTCTCAGTCTCAGACAGTAAGCTCCTCTTCCATCTCTCACTCGCTTGGTCCTCAAAGAACATTGGACGCAGGTCAAGTGAAGATGATGATGCTGATTTTGATGATGGTTTTGTCTTTGAGATTGATCCTCCTAGCTTGCTAGTGGACCTTGATAAACTAACCATTGGAGACATGATCGGAGAAGGGTCTTATTACTCCATTGTATACAAAGGATGGTATGAGTGCCATCCTGTTGCTGTAAAGGTTATACTCCCAGAAAGAACAAGGGATGCTACACCACAATGTAAGGCGAAATTTCAGCGGGAGGTGAACTTGATATCTAGGATTCAACATAAAAATATTGTGAAGTTTATTGGGGCCTCTGTGGAACCATCAATGATGATAATCACAGAACTTTTGGAAGGTGGTTCACTTCAAAAGAACTCGAAGAGCATCTATCCAATGACTCTTGATTTGGAAGTATCTTTATGTTTTGCTCTGGACATTTCTCAAGCTATGGAGTATTTGCATGCAAATGGCATCATTCACCGTGATCTGAAGCCTGGTAGTACAAAAGATAAGATGCGTGTTAAAGTTGGTGATTTTGGGATTGCTAGAGAGGATATATGTGATGAGATGACTTGTGAGGCTGGTAGTTACCGATATATGGCTGATAAGTTATTCAGCAAAGATCCACTTCCAAAGGAAGCAAAGAAATGCTACGATCACAAGGCAGATGTCTACAGCTTCGCGATAGCTCTGTGGTCGTTGATCGAAAATCAAATTCCATTTAAAGAAAGGACAGACTTGATGGCAGCATACGCTACAGAAAATAACTTGAGGCCAAGTGTGGATGAGTTTCCAAAACATGTACTTCCTCTCTTGCAGTCCTGCTGGGCAGAGGACCCAAAACTCCGACCAGAATTCACCGAGATCACTCAAACTCTGGGAGTGCTTCTCCAGAATTATTGCTCGACACTTGCCAGCATAACTGAGGTTGAAGAAACCGATAGCAACAGTGAGGAAGAAAGTCCAAAAGCACAGACCACAAGCCTAAACTCTGGGGAGGAAAACATATCTTCCAAACATGATGATAAGACTAAAGAACCCAATGACCGCAAAGAGGAAGAAGAGTCTCATTCTCAGAGTACAGCACAGACCTCCTTCCCTGACTCAACGGAAGGCAAACCAAAAAAGAAAAGCAAGTTCAAGTGTTTATTTGCGTGTTTCCGCGGTTGCTTTGGCATTTGA 1251 0.4285 MAKGCAQLSVSDSKLLFHLSLAWSSKNIGRRSSEDDDADFDDGFVFEIDPPSLLVDLDKLTIGDMIGEGSYYSIVYKGWYECHPVAVKVILPERTRDATPQCKAKFQREVNLISRIQHKNIVKFIGASVEPSMMIITELLEGGSLQKNSKSIYPMTLDLEVSLCFALDISQAMEYLHANGIIHRDLKPGSTKDKMRVKVGDFGIAREDICDEMTCEAGSYRYMADKLFSKDPLPKEAKKCYDHKADVYSFAIALWSLIENQIPFKERTDLMAAYATENNLRPSVDEFPKHVLPLLQSCWAEDPKLRPEFTEITQTLGVLLQNYCSTLASITEVEETDSNSEEESPKAQTTSLNSGEENISSKHDDKTKEPNDRKEEEESHSQSTAQTSFPDSTEGKPKKKSKFKCLFACFRGCFGI* 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g01682 416 MobiDBLite consensus disorder prediction 358 381 - -
Rops1g01682 416 Gene3D Phosphorylase Kinase; domain 1 51 141 - -
Rops1g01682 416 FunFam serine/threonine-protein kinase STY46-like 52 141 - -
Rops1g01682 416 SUPERFAMILY Protein kinase-like (PK-like) 52 330 IPR011009 -
Rops1g01682 416 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 56 316 - -
Rops1g01682 416 Gene3D Transferase(Phosphotransferase) domain 1 143 390 - -
Rops1g01682 416 MobiDBLite consensus disorder prediction 333 400 - -
Rops1g01682 416 MobiDBLite consensus disorder prediction 343 357 - -
Rops1g01682 416 ProSiteProfiles Protein kinase domain profile. 60 320 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops1g01682 416 Pfam Protein tyrosine and serine/threonine kinase 60 316 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g01682 Rops-Chr1 35438010 35443538 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops1g01682 41 351 MAP Kinase Kinase Kinase AT5G66710 50.476 5.17e-101 305
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Rops1g01682 PK_Tyr_Ser-Thr 5.5e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g01682 - K04427 gsj:114390113 410.994