Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g01681 ATGGGAAGTGGAGAAGAAAGCACGGCTAAACCTTCTAAACCATCTTCTTCAACTCAGATACCACTGGCACCTTCATATCCTGACTGGTCAAGCTCCATGCAGGCTTATTATGCTCCTGGAGTCACTCCACCTCCTTTTTTTGCCTCAACTGTTGCTTCCCCAACTCCCCATCCCTATTTGTGGGGAAGCCAGCATCCTCTAATTCCGCCATATGGTACTCCTGTTCCATATCCAGCTATATATCCTCCTGGAAGTGTCTATGCTCATCCTAGCATGGCAACGACTCCAAGCACCGCACAGCATGGTACAGAGTTTGTAGGCAAGGGACCTGATGGAAAAGATCGGGTTTCTCCCAAAAATTCGAAGGGAGTGTCTGCAAATACTGGTTCCAAAACAGGAGACAATGGAAAGGCAGGCTCAGGGTCAGGAAATGATGGCATCTCACAAAGTGCTGAAAGTGGTTCAGAGGGATCATCAGATGCTAATGATGAGGATACTAACCTACAGGAATCAGCTGCAAACAAGAAGGGGAGCTTCAACCAAATGCTTGTTGATGGTGCCAATGCACAGAACAATTCTGTTGGTGTTATTTCTCAACCTGCTGTACCTGGAAAGCCTGTTGTGTCAACATCTGCAACTAATCTTAATATTGGAATGGACTTGTGGAACGCATCCTCTGCTGGTGCTGAAGCTGCAAAAATGAGAGACAATTCATCTGCTGCTTCGGGAGCTGTTACTCCTTCAACCATAATGGGATGTGAAGTCGCACTTGGTGAACAATGGATACAAGACGAACGTGAGCTGAAAAGACAGAAGAGGAAACAGTCTAATAGAGAGTCAGCTAGGAGGTCAAGACAACGCAAGCAGGCTGAGTGTGAAGAGTTACAAAAGAGGGTGGAGTCGCTGGGAAATGAGAATCGAACTTTGAGAGAAGAACTTCAGAGAGTATCTGAAGAATGTGAGAAGCTTACATCGGAAAACAACTCTATCAAGGAAGAATTGAAACGGTTGTGTGGGCCAGAAGCAGTTGCTAACCTTGAATAA 1044 0.4588 MGSGEESTAKPSKPSSSTQIPLAPSYPDWSSSMQAYYAPGVTPPPFFASTVASPTPHPYLWGSQHPLIPPYGTPVPYPAIYPPGSVYAHPSMATTPSTAQHGTEFVGKGPDGKDRVSPKNSKGVSANTGSKTGDNGKAGSGSGNDGISQSAESGSEGSSDANDEDTNLQESAANKKGSFNQMLVDGANAQNNSVGVISQPAVPGKPVVSTSATNLNIGMDLWNASSAGAEAAKMRDNSSAASGAVTPSTIMGCEVALGEQWIQDERELKRQKRKQSNRESARRSRQRKQAECEELQKRVESLGNENRTLREELQRVSEECEKLTSENNSIKEELKRLCGPEAVANLE* 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g01681 347 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 267 330 IPR004827 GO:0003700|GO:0006355
Rops1g01681 347 Pfam bZIP transcription factor 265 327 IPR004827 GO:0003700|GO:0006355
Rops1g01681 347 MobiDBLite consensus disorder prediction 88 176 - -
Rops1g01681 347 SUPERFAMILY Leucine zipper domain 268 324 IPR046347 GO:0003700|GO:0006355
Rops1g01681 347 Pfam G-box binding protein MFMR 1 92 IPR012900 -
Rops1g01681 347 Coils Coil 278 333 - -
Rops1g01681 347 Gene3D - 268 322 - -
Rops1g01681 347 CDD bZIP_plant_GBF1 270 320 IPR045314 GO:0003700|GO:0006355
Rops1g01681 347 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 272 287 IPR004827 GO:0003700|GO:0006355
Rops1g01681 347 PANTHER G-BOX-BINDING FACTOR 3-RELATED 1 342 IPR044827 GO:0003700|GO:0006355|GO:0043565
Rops1g01681 347 MobiDBLite consensus disorder prediction 267 293 - -
Rops1g01681 347 MobiDBLite consensus disorder prediction 1 25 - -
Rops1g01681 347 SMART brlzneu 265 329 IPR004827 GO:0003700|GO:0006355
Rops1g01681 347 MobiDBLite consensus disorder prediction 120 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g01681 Rops-Chr1 35426716 35432597 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops1g01681 1 347 bZIP Transcription Factor Family AT4G36730 53.429 2.81e-106 312
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Rops1g01681 MFMR 9.2e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g01681 K09060 - gmx:100808533 551.206