Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g01666 ATGAAACAGACAACTGCAAAGTCATCCCTTAGGAGGCTTTGTCCAAACATTGATAAAGAAGATGGATTGGAGACTGTTCTTGAAATACCAATACCCGAAGAAATGTTCGCAAACATGGGAAGCAACGTGACATTGCGATGGCAAAACATGTTAACGTGGATGAAGGGTCAAACAGAAGACAAATTGGCAACCCCTACAGTTGCAGCACGCTTAAATGAGCTTCGCTTTCTCCTATACCTTGTTGGATCCCCTCTTATCCCTCTTCAAGTCCAAGTAGGCCATTCCATCCACCGCCCAGTCAGAGATTGTTCCATTGAAGCATCAACGGCAAAATATATAGTGCAACAATATATAGCGGCAACAGGAGGACAACCAGCATTGAATGCAGTGGAAAGTATGTGTGTAACGGGGCAGATCAAGATTAGTGCGTCGGATTTTTATCATACCAGTCAAAGCATTGATGTGAAGAAAACATCCGAAGAGATTGGGGGGTTCGTTTTATGGCAAAAGGACCCAGATTTGTGGCATTTAGAGCTCATTGTATCCGGTTGCAAGGTTTGTTGTGGTAGCAATGGCAAGATCTCATGGCGTCATTCCTCCAACCAACAAACACCCGTTTCAAAAGGGGCTCCTAGACCTCTCCGTCGTTTCCTTCAGGGATTGGATCCGAGGGCCACAGCAAACTTATTTTTGGACGCAGCATGCATAGGAGAGAAAATAATCAATGATGAGGAGTGTTTCATTCTGAAATTGGAAACAAGCCCCGCAATTCGTGAGGCCCAAAGTGGTCCAAACTTTGAGATTATCCACCACACCATATGGGGCTATTTCAGCCAGCGATCTGGTCTCTTAATTCAGTTCGAAGATTCTAGATTACTCACTATGAGAACCAAAGATGATGATGACATTTTCTGGGAAACAAGTTTAGAATCAGTAATTGAAGATTATAAGTACGTGGATGGGATAAATGTGTCACACAGTGGCACCACTCGAGTTACAGTTTCAAGATATGGTGAGCAATCGTCTAACCATAAAAGAGAATTGGAAGAGAGGTGGAAGATTGAGGAGGTAGATTTTAATATATGGGGTTTGACTTCTGAAAGCTTTTTGCCTCCCACTAACTTACAAAAGCCACAAAATACTTTGTAA 1149 0.4282 MKQTTAKSSLRRLCPNIDKEDGLETVLEIPIPEEMFANMGSNVTLRWQNMLTWMKGQTEDKLATPTVAARLNELRFLLYLVGSPLIPLQVQVGHSIHRPVRDCSIEASTAKYIVQQYIAATGGQPALNAVESMCVTGQIKISASDFYHTSQSIDVKKTSEEIGGFVLWQKDPDLWHLELIVSGCKVCCGSNGKISWRHSSNQQTPVSKGAPRPLRRFLQGLDPRATANLFLDAACIGEKIINDEECFILKLETSPAIREAQSGPNFEIIHHTIWGYFSQRSGLLIQFEDSRLLTMRTKDDDDIFWETSLESVIEDYKYVDGINVSHSGTTRVTVSRYGEQSSNHKRELEERWKIEEVDFNIWGLTSESFLPPTNLQKPQNTL* 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g01666 382 PANTHER LIPASE 11 377 IPR006873 -
Rops1g01666 382 Pfam Protein of unknown function (DUF620) 133 372 IPR006873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g01666 Rops-Chr1 35138488 35141166 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g01666 - - gmx:102664990 711.835
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops1g01666 1 35138488 35141166 Rops1g01666 1 35138488 35141166 ECH
Rops10g02601 10 45134528 45137309 Rops1g01666 1 35138488 35141166 ECH
Rops3g00561 3 7002475 7005259 Rops1g01666 1 35138488 35141166 ECH