Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g01659 ATGTACTATTATGGAGATCCATCTGGAAAAGCGGGTAACTATTACAACAGCGGGCAGCACCCTGGTTACTTTGGTGGTCCACATGGGGACCATGTTGTGAGGGTACAAAATGGAATGGGTCCTAATGGTGGTGGTGGTGGATGGGGTGGACCACCACCACCTCCTCCATTAATGAACAGTGCTGAGATGAGCTCCAATTTCTCAACGGGACCACCCCCTCTGCCTCCTCCCTCACCAAACCTTGCTTTAGGACTCAAGGGAGGTACCTTCACTTATGAGGAATTGGCAGCAGCCACAAATGGATTTGCTGAAGCCAATATGATAGGACAAGGTGGCTTTGGTTATGTCCATAAGGGTATATTTCCTAATGGAAAGGAAGTGGCAGTTAAAAGTCTTAAATCGGGTAGTGGCCAAGGAGAAAGAGAGTTCCAAGCTGAGATTGACATCATTAGTCGTGTTCATCATCGCCATCTTGTGTCACTTGTTGGATACTCTATTGCTGGTGACCAGAGAATGTTGGTCTATGAGTTTATTCCCAATAATACCTTAGAATATCACCTTCATGGAAAGGGTAATCCTACCATGGATTGGCCTACTAGAATGCGGATTGCAATAGGATCCGCTAAAGGGCTTGCCTATCTTCATGAGGACTGTCATCCTCGCATAATCCATCGTGATATCAAAGCTGCGAATGTCCTTATTGATGATAGCTTCGAAGCAAAGGTTGCTGATTTTGGATTGGCTAAGTTGACTACTGATAATAATACTCATGTATCCACTCGTGTCATGGGAACTTTCGGGTACCTAGCCCCTGAATATGCATCAAGTGGAAAATTGACAGAGAAATCTGACGTTTTCTCATTTGGGGTCATGCTATTGGAACTCATAACTGGGAAGCGACCTGTGGATGTCTCAAATGCCATGGACGACAGCTTAGTGGACTGGGCTCGACCACTACTGACTCGTGGATTGGAAGAAGATGGAAACTTTGGAGAGTTGGTGGATCTATTTTTGGAGGGAAACTACAATCCTCAAGAACTCACAAGGATGGCAGCTTGTGCTGCTGCTAGCATTCGCCACTCTGCCAAGAAGCGTCCAAAAATGAGCCAGATTGTGAGATCATTGGAAGGAGATGTGTCACTGGACGATTTGAAGGAGGGGATTAAGCCAGGGCACAACAATGTTCACACCTCTTCATCTGGGAGCTCAGAGTATGATACAATGCAATACAATGCTGATTTACTGAAGTTCAGAAAGGCAGTGTTTTCCTCCAGCCAGGAATTTGGCAACAGCGGCGGCTCTAGTGGTGAGACCCCGACACAGAAGCCGCCACCGCTGCCGCCGCTGCTTTAG 1353 0.4678 MYYYGDPSGKAGNYYNSGQHPGYFGGPHGDHVVRVQNGMGPNGGGGGWGGPPPPPPLMNSAEMSSNFSTGPPPLPPPSPNLALGLKGGTFTYEELAAATNGFAEANMIGQGGFGYVHKGIFPNGKEVAVKSLKSGSGQGEREFQAEIDIISRVHHRHLVSLVGYSIAGDQRMLVYEFIPNNTLEYHLHGKGNPTMDWPTRMRIAIGSAKGLAYLHEDCHPRIIHRDIKAANVLIDDSFEAKVADFGLAKLTTDNNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGKRPVDVSNAMDDSLVDWARPLLTRGLEEDGNFGELVDLFLEGNYNPQELTRMAACAAASIRHSAKKRPKMSQIVRSLEGDVSLDDLKEGIKPGHNNVHTSSSGSSEYDTMQYNADLLKFRKAVFSSSQEFGNSGGSSGETPTQKPPPLPPLL* 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g01659 450 MobiDBLite consensus disorder prediction 385 405 - -
Rops1g01659 450 ProSitePatterns Protein kinases ATP-binding region signature. 108 130 IPR017441 GO:0005524
Rops1g01659 450 ProSiteProfiles Protein kinase domain profile. 102 381 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops1g01659 450 ProSitePatterns Serine/Threonine protein kinases active-site signature. 222 234 IPR008271 GO:0004672|GO:0006468
Rops1g01659 450 SMART serkin_6 102 363 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops1g01659 450 SUPERFAMILY Protein kinase-like (PK-like) 81 375 IPR011009 -
Rops1g01659 450 FunFam proline-rich receptor-like protein kinase PERK1 80 177 - -
Rops1g01659 450 Gene3D Transferase(Phosphotransferase) domain 1 178 387 - -
Rops1g01659 450 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 80 420 IPR047117 -
Rops1g01659 450 FunFam Proline-rich receptor-like protein kinase PERK1 178 386 - -
Rops1g01659 450 Gene3D Phosphorylase Kinase; domain 1 82 177 - -
Rops1g01659 450 MobiDBLite consensus disorder prediction 425 439 - -
Rops1g01659 450 Pfam Protein tyrosine and serine/threonine kinase 106 312 IPR001245 GO:0004672|GO:0006468
Rops1g01659 450 MobiDBLite consensus disorder prediction 425 450 - -
Rops1g01659 450 MobiDBLite consensus disorder prediction 35 75 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g01659 Rops-Chr1 35089032 35093626 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops1g01659 78 422 Trihelix Transcription Factor Family AT1G70460 61.671 4.58e-148 436
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Rops1g01659 PK_Tyr_Ser-Thr 1.1e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g01659 - - gmx:100777163 746.888