Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g01654 ATGTCTGATTCACACCTAACTTTCTCTTCTCTTTCTTCCATTCTTGCTCTTCTTCTAATCTTCATATTCATTCTCATCAAAAGAAAGCAAGCCAGACCCAGGCTCAATCTTCCCCCAGGGAAAATGGGTTGGCCCTTTCTTGGGGAAACCATTGGGTATTTGAAGCCTTATCCTGCTACTACATTAGGAGAATTTATGGAGCAGCACACAGCAAGGTATGGTAAAATTTACAAGTCAAAATTGTTTGGAGAACCAGCAATAGTGTCAGCAGATGCAGGGTTGAATAGATTCATATTACAAAACGAAGGGAAATTGTTCGAGTGCAGCTATCCAAGAAGCATTGGTGGAATACTTGGGAAATGGTCTATGTTGGTCTTGGTTGGTGACATGCATAAGGACATGCGGGTTATATCTCTCAACTTTCTAAGCCATGCCAGGCTCAGAACTCATCTCTTAAAGGAAGTGGAGAAACATACCCTTCTGGTTCTAAACTCTTGGAAGGAAAATTGCACATTCTCAGCTCAAGACGAAGCAAAGAAGTTCACCTTCAATTTGATGGCAAAACATATCATGAGCCTGCAACCTGGGAATATTGAGACAGAGCAACTAAAGAAAGAGTATGTCACTTTCATGAAAGGGGTGGTATCTGCGCCATTGAATTTCCCTGGAACTGCATACAGGAAGGCATTAAAGTCTAGGTCTACCATACTGAAGTTCATAGAGGGGAAAATGGAAGAAAGGATCAAAAGAATCCAAGAGGGAAATGAAAGTTTGGGGGAGGATGATCTTCTAAACTGGGTTTTGAAGCATTCGAATCTTTCAACTGAGCAAATTCTTGATTTGATTCTCAGCTTGCTCTTTGCTGGCCATGAAACTTCATCTGTAGCCATAGCTCTAGTTATTTACTTCTTACCGGGTTGTCCTCAAGCTATTCAACAGTTAAGGGAAGAACACAGAGAAATTGCCAGAGCCAAGAAGCAAGCAGGGGAAGTTGAATTGACTTGGGATGACTACAAAAGAATGGAATTTACTCACTGTGTTGTGAACGAGACACTTAGGCTGGGAAATGTTGTGAGGTTCCTTCACAGGAAGGCTCTGAAAGATGTTCGGTACAAAGGTTATGACATTCCATGTGGGTGGAAAGTCCTTCCGGTGATTGCAGCCGTGCATCTGGATCCTTCACTTTTTGACCAACCTCAACACTTCAATCCATGGAGATGGCAGAACAATGGGAGCCGTGGAAGTTGCCCGATCTCAAGTTCAAGTTCAAGTTCAGCTAGCAATAACTTCTTACCGTTCGGGGGAGGACCACGATTGTGTGCAGGATCAGAGTTAGCAAAGCTTGAAATGGCTGTTTTCATCCACCATCTCATACTCAACTACCATTGGGAATTGGCAGATACAGATCAAGCTTTTGCCTACCCTTTTGTCGATTTTCCAAAAGGCCTACCCATCAGAGTCCAAACCCATGATTTGAGTCACCAAAATTCAATTAGTTAA 1500 0.426 MSDSHLTFSSLSSILALLLIFIFILIKRKQARPRLNLPPGKMGWPFLGETIGYLKPYPATTLGEFMEQHTARYGKIYKSKLFGEPAIVSADAGLNRFILQNEGKLFECSYPRSIGGILGKWSMLVLVGDMHKDMRVISLNFLSHARLRTHLLKEVEKHTLLVLNSWKENCTFSAQDEAKKFTFNLMAKHIMSLQPGNIETEQLKKEYVTFMKGVVSAPLNFPGTAYRKALKSRSTILKFIEGKMEERIKRIQEGNESLGEDDLLNWVLKHSNLSTEQILDLILSLLFAGHETSSVAIALVIYFLPGCPQAIQQLREEHREIARAKKQAGEVELTWDDYKRMEFTHCVVNETLRLGNVVRFLHRKALKDVRYKGYDIPCGWKVLPVIAAVHLDPSLFDQPQHFNPWRWQNNGSRGSCPISSSSSSSASNNFLPFGGGPRLCAGSELAKLEMAVFIHHLILNYHWELADTDQAFAYPFVDFPKGLPIRVQTHDLSHQNSIS* 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g01654 499 CDD CYP90-like 69 487 - -
Rops1g01654 499 Coils Coil 307 334 - -
Rops1g01654 499 PRINTS P450 superfamily signature 346 357 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g01654 499 PRINTS P450 superfamily signature 431 440 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g01654 499 PRINTS P450 superfamily signature 288 305 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g01654 499 PRINTS P450 superfamily signature 440 451 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g01654 499 FunFam Cytochrome P450 90B1 27 489 - -
Rops1g01654 499 PANTHER CYTOCHROME P450 26 33 468 - -
Rops1g01654 499 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 433 442 IPR017972 GO:0005506|GO:0016705
Rops1g01654 499 Pfam Cytochrome P450 38 469 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g01654 499 Gene3D Cytochrome P450 26 488 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g01654 499 SUPERFAMILY Cytochrome P450 34 487 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g01654 499 PRINTS E-class P450 group I signature 277 294 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g01654 499 PRINTS E-class P450 group I signature 430 440 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g01654 499 PRINTS E-class P450 group I signature 440 463 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g01654 499 PRINTS E-class P450 group I signature 345 363 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g01654 499 PRINTS E-class P450 group I signature 385 409 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g01654 499 PRINTS E-class P450 group I signature 70 89 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g01654 Rops-Chr1 34987462 34992101 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops1g01654 27 408 Cytochrome P450 AT3G50660 76.179 0.0 642
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g01654 K09587 - gmx:100802498 876.315
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops1g01654 1 34987462 34992101 Rops1g01654 1 34987462 34992101 ECH
Rops1g01654 1 34987462 34992101 Rops2g03374 2 62083965 62089425 PCT