Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Rops1g01641 | ATGGCATCGTCTTGGACTCAAAGGCAAAACAAGCTATTTGAAGAGGCCCTTGCTATATATGATAGGGAAACCCCTGACAGGTGGCAGAATGTTGCAAAAGTGGTGGGAAAATCCGTAGAGGAGGTGAAAAAGCACTACGAGATCCTCAAAGAAGATGTCAAGCGCATTGAGCGTGGTGAGGTCCCATTTCCTTATAAAGATTTGAAAACCAATGAAGGGGTTGTTTTGCTGCTACAAACGGTGGAACAAGGGGCTTCAATGGTTGGTGTGGTGGGCTTGCGGTGGTGTTGTGCTGCAGATCTGAAAATCAATGGTGGAGGAGATCTGATGCTAAGGTTCATTCATTCACGGGTCTCCTTTTTTTTGATGAAACGGTAG | 378 | 0.4577 | MASSWTQRQNKLFEEALAIYDRETPDRWQNVAKVVGKSVEEVKKHYEILKEDVKRIERGEVPFPYKDLKTNEGVVLLLQTVEQGASMVGVVGLRWCCAADLKINGGGDLMLRFIHSRVSFFLMKR* | 126 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Rops1g01641 | 125 | SMART | sant | 1 | 52 | IPR001005 | - | |
Rops1g01641 | 125 | CDD | SANT | 4 | 50 | IPR001005 | - | |
Rops1g01641 | 125 | ProSiteProfiles | SANT domain profile. | 1 | 54 | IPR017884 | - | |
Rops1g01641 | 125 | PANTHER | MYB FAMILY TRANSCRIPTION FACTOR-RELATED | 3 | 67 | IPR044636 | GO:0003700 | |
Rops1g01641 | 125 | FunFam | Transcription factor SRM1 | 1 | 63 | - | - | |
Rops1g01641 | 125 | Coils | Coil | 39 | 59 | - | - | |
Rops1g01641 | 125 | SUPERFAMILY | Homeodomain-like | 3 | 57 | IPR009057 | - | |
Rops1g01641 | 125 | Gene3D | - | 2 | 63 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Rops1g01641 | Rops-Chr1 | 34746571 | 34753535 | Dispersed/Wgd |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Rops1g01641 | - | - | pvu:PHAVU_003G254400g | 117.857 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Rops2g03358 | 2 | 61709767 | 61709988 | Rops1g01641 | 1 | 34746571 | 34753535 | ECH | |
Rops1g01641 | 1 | 34746571 | 34753535 | Rops1g01641 | 1 | 34746571 | 34753535 | ECH | |
Rops3g00562 | 3 | 7026536 | 7028353 | Rops1g01641 | 1 | 34746571 | 34753535 | ECH | |
Rops1g01641 | 1 | 34746571 | 34753535 | Rops2g03358 | 2 | 61709767 | 61709988 | ECH |