Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g01599 ATGAATATGGTGCCTGAACGAGCTAAGCTGCACATAGCTTTAACGTTTCTACAATTTTGTTATGCAGGAAATCATATATTTCTGAGAATTGCACTTAATACAGGCGTGAGCAAGCTTGTCTTTCCTATCTATAGAAACATCATCGCTCTGGTTCTTCTGGGTCCCCTCGCGTATTTTTCAGATAAGAAAGACAGGCCACCAATGACCAGTTATTGTCTGGTACAATTTTTCCTACTTGGGCTTGTTGGAATAACAATGAAAGAAGGATTCTACCTCTTGGGTTTGGGGAACACATCACCTACTTTTGCTGCTGCTATGCAGAATTCTGTTCCAGCCCTGACCTTTCTGATGGCTGCGGTGCTCAGATATGAGAGCGTGCACTTCAATAGGATACATGGTCTGGCCAAGGTCCTAGGAGTCCTTGCTTCTGTTGGAGGAGCTTCAGTCATTACCCTTTACAAAGGACCTACCATTTATACTCCTCATTTAGCATTACACCAAGAACAATTCTTGTCTGCATTTGGGGATGCCACAGGAAAAAACAGGAACTTGGGTGGCATCTATCTTTTTGGTCACTGCTTTTGTTGGTCTGGTTGGATTGTGATGCAAGCATTTGTTCTGAAAAATTACTCAGCCCCACTCACAGTTTCTGCATTTACTTGCTTCTTTGGTATTGTGCAGTTTATGACCATTGCAGCCTTTTTCGAGAGGGATCCCAAAGCCTGGCAGCTCAATTCTGTAGAGATCTACAGTATTTTGTACTCGGGACTGGTGAATTCAGGGCTAGCAGCAGCAATACAGATATGGACTATTAGCAAGGGAGGACCAGTGCTTGCTTCAATTTATCTACCCTTGCAGACATTAATCGTAGCTTTGATGGCATCCATTGTTTTCGATGAAGAATTCTTCTTGGGAGGGATCATTGGAGCTATCTTAATTATATCTGGCTTATACCTTGTTGTCTGGGGAAGAAGTCAAGAAACCAAGTCTGCCAAAGAGGTCATAGTCCCCATTGAACGTGAGAATCATCCAGAAGAAAAAAGTGACAGTTCTTCCCTCATCCAACCGTTGATTCCTGCATAA 1083 0.4294 MNMVPERAKLHIALTFLQFCYAGNHIFLRIALNTGVSKLVFPIYRNIIALVLLGPLAYFSDKKDRPPMTSYCLVQFFLLGLVGITMKEGFYLLGLGNTSPTFAAAMQNSVPALTFLMAAVLRYESVHFNRIHGLAKVLGVLASVGGASVITLYKGPTIYTPHLALHQEQFLSAFGDATGKNRNLGGIYLFGHCFCWSGWIVMQAFVLKNYSAPLTVSAFTCFFGIVQFMTIAAFFERDPKAWQLNSVEIYSILYSGLVNSGLAAAIQIWTISKGGPVLASIYLPLQTLIVALMASIVFDEEFFLGGIIGAILIISGLYLVVWGRSQETKSAKEVIVPIERENHPEEKSDSSSLIQPLIPA* 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g01599 360 MobiDBLite consensus disorder prediction 340 360 - -
Rops1g01599 360 SUPERFAMILY Multidrug resistance efflux transporter EmrE 44 139 - -
Rops1g01599 360 PANTHER WAT1-RELATED PROTEIN 12 332 IPR030184 GO:0016020|GO:0022857
Rops1g01599 360 Pfam EamA-like transporter family 185 321 IPR000620 GO:0016020
Rops1g01599 360 Pfam EamA-like transporter family 18 137 IPR000620 GO:0016020
Rops1g01599 360 SUPERFAMILY Multidrug resistance efflux transporter EmrE 241 325 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g01599 Rops-Chr1 34177448 34179785 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops1g01599 4 358 Nodulin-like Gene Family AT1G75500 57.453 8.69e-144 410
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g01599 - - gmx:100790386 580.096