Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g01592 ATGGAATGGATCATAGGTGTTTGGGTTGTGATGGGGTTCATCTTCTTTATGAGTTGGTGGTTTGTATATGGGAAGAAGGAGAATAGGGTGGGAAAGGGAAAAGTTCCAAAAGGGAACTCAGGTTGGCCTTTACTTGGAGAGACCCTTGATTTCATTGCTTCTTGCTACACCTCTCGCCCTGTCAGTTTCTTGGAAAAGCGCAAGTCTCTGTATGGGAATGTGTTTAAGACTAGCCTTCTGGGAAGCAGTGTGATCGTGTCGACAGACCCGGACGTGAACAAGGTGATTCTGCAGAACCAGGGGAATATCTTCGTCCCTGCTTATCCAAAATCGATTAGAGAATTAATGGGAGAACACTCTATACTCAAAATGAACGGGAGCATGCACAAGAAAGTGCATGCACTCATCGGAGGCTTCCTTCGATCACCACAACTCAAAGCTCGAATCACCAGAGACATTGAACACACTGTCAAACAATGCTTAGCTTCTTGGACCCACCAAACAGTATACATTCAAGATCAAGTCAAAAGGATTACGTTTACTGTTTTGGTGAAAGTTTTGTTGAGCGTTGGTCCTGGTGAAGATTTGGACTTCCTCAAGAGAGAATTTGAAGAATTCATCAAAGGGTTGATTTGCATACCCCTCAAGTTTCCAGGAACAAGACTGCATAAATCCTTGAAGGCTAAGGAAAGGATGGTGAAGATGGTGAGGAGGATAATAGAGGAGAGGAAGAAGATACTTGATGATGGAAATGATAATGAGGGTGCAGTGAATGATGTGGTGGACGTGCTCCTACGGGAAAAGGGTGAAAGCTCAAGCCTGACTTTGGAAATGATTAGCCAAAACATCATAGAGATGATGATCCCAGGGGAGGAGACCCTTCCTACGGCCATGACCATGGCCCTCAAGTTCCTCACTCACTCCCCTCTCGCCTTATCCAAACTCAAGGAGGAAAACATGGAATTGAAGAGGCAGAAGACTAATTGCTCGGAGAATTATGCATGGACTGATTACATGTCACTACCATTTACTCAAAATGTCATCAGCGAAACTCTTAGAATGGCCAATATTGTCAATGGCATTTGGAGGAAAGCAGTCAAAGATGTAGAAATTAAAGGGTACCTAATTCCAAAGGACTGGAGTGTTATGGCTTCTCTTAGCTCTGTTCACTTGGATGCCAAGTACTATGAAAACCCTTTTGAGTTTGATCCATGGAGATGGGAGAAAATTGGAGCTGTGGCTAATAACAACTGCTTTGCCCCATTTGGTGGTGGACATAGACTATGCCCTGGGTTAGAACTCTCCAGGCTAGAGCTCTCTATTTTCCTTCACCATCTTGTTACTACTTACAGATGGGTCGCTGAGAGAGATGAAATAATATACTTTCCAACGGTCAAGATGAAGAACAAGCTACCAATTACTGTGCAACCCATCAACGCTTTATTGGATTAG 1452 0.4373 MEWIIGVWVVMGFIFFMSWWFVYGKKENRVGKGKVPKGNSGWPLLGETLDFIASCYTSRPVSFLEKRKSLYGNVFKTSLLGSSVIVSTDPDVNKVILQNQGNIFVPAYPKSIRELMGEHSILKMNGSMHKKVHALIGGFLRSPQLKARITRDIEHTVKQCLASWTHQTVYIQDQVKRITFTVLVKVLLSVGPGEDLDFLKREFEEFIKGLICIPLKFPGTRLHKSLKAKERMVKMVRRIIEERKKILDDGNDNEGAVNDVVDVLLREKGESSSLTLEMISQNIIEMMIPGEETLPTAMTMALKFLTHSPLALSKLKEENMELKRQKTNCSENYAWTDYMSLPFTQNVISETLRMANIVNGIWRKAVKDVEIKGYLIPKDWSVMASLSSVHLDAKYYENPFEFDPWRWEKIGAVANNNCFAPFGGGHRLCPGLELSRLELSIFLHHLVTTYRWVAERDEIIYFPTVKMKNKLPITVQPINALLD* 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g01592 483 Coils Coil 312 332 - -
Rops1g01592 483 FunFam 3-epi-6-deoxocathasterone 23-monooxygenase CYP90D1 25 478 - -
Rops1g01592 483 CDD CYP90-like 67 477 - -
Rops1g01592 483 PRINTS E-class P450 group IV signature 413 429 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g01592 483 PRINTS E-class P450 group IV signature 62 85 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g01592 483 PRINTS E-class P450 group IV signature 341 357 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g01592 483 PRINTS E-class P450 group IV signature 390 408 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g01592 483 PRINTS E-class P450 group IV signature 429 447 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g01592 483 PANTHER CYTOCHROME P450 26 35 460 - -
Rops1g01592 483 Pfam Cytochrome P450 36 455 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g01592 483 Gene3D Cytochrome P450 25 478 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g01592 483 PRINTS P450 superfamily signature 289 306 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g01592 483 PRINTS P450 superfamily signature 429 440 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g01592 483 PRINTS P450 superfamily signature 346 357 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g01592 483 PRINTS P450 superfamily signature 420 429 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g01592 483 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 422 431 IPR017972 GO:0005506|GO:0016705
Rops1g01592 483 SUPERFAMILY Cytochrome P450 33 477 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g01592 Rops-Chr1 34085423 34092645 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops1g01592 34 451 Cytochrome P450 AT3G13730 52.983 1.82e-165 474
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g01592 K12637 - gmx:100799030 808.905
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops1g01592 1 34085423 34092645 Rops1g01592 1 34085423 34092645 ECH