Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g01583 ATGGATTCAAGTCTAAAATCACAAACCATAGCCAACCTTGAACTAGAGCCATTCCAAATGGCTATCTTATTCATTGTCCCACTAATAGTGGCACTGGTGTTGGGTTTAATCTCTCGAATTCGAAGAAGAGCACCGTATCCACCAGGACCAAAAGGGTTACCCATCATTGGCAACATGTTCATGATGGACCAGTTAACCCACCGTGGTTTGGCCAATTTGGCAAAACAATACGGTGGCATCTTCCACCTCCGCATGGGGTTCCTCCACATGATGGCTATTTCAGAACCAGACACAGCACGTCAAGTTCTCCAAGTGCAAGACAACATCTTCTCCAACCGTCCAGCCACCATAGCCATAAGCTACCTCACCTACGACCGTGCTGACATGGCTTTCGCTCACTATGGACCCTTCTGGCGTCAGATGAGGAAGCTCTGTGTCATGAAGCTTTTCAGCCGCAAACGTGCTGAGTCATGGCAATCCGTGAGGGATGAAGTTGACGCCGCCGTGAACACCGTCGCGGCCAACACCGGCAAGGCGGTGAACATAGGAGAATTAGTGTTCAACCTCACGAAGAATATAATATATCGTGCTGCTTTTGGGTCGAGTTCGCAAGAAGGGCAAGATGAGTTTATAGGGATATTGCAGGAGTTTTCAAAGTTGTTTGGAGCTTTTAATATTGCAGATTTTATACCCTTTCTTGGGGCTATTGACCCTCAAGGGCTTAACACGAGGCTTGTTAAGGCTCGTGGGGCGTTGGATAGTTTCATAGATAAGATCGTGGATGAACATGTGGAGAAGAAGAGGGATCTGAAACATGATGGTGATGAAGAAACTGATATGGTGGATGAGTTGCTGGCTTTTTACGGTGATGAGGCTAAGGTGAATAATGAAACAGATGATCTTCAGAATTCTATCAGACTCACCAAGGATAACATCAAAGCCATCATTATGGACGTGATGTTTGGAGGGACAGAGACAGTAGCGTCGGCAATAGAGTGGGCCATGGCAGAGTTAATGAGAAGCCCAGAAGATCTGAAAAGAGTCCAACAAGAGCTGGCAGATGTGGTGGGCCTGGCCCGTCGGGTCGAGGAGCCCGATTTCGAGAAACTAACTTACCTCAAATGTGCCCTCAAGGAAACCCTACGCCTCCACCCACCGATCCCACTCCTCCTCCACGAGACGTCGGAGGACGCGACGGTCGCCGGTTACTTCATCCCAAAGAGGGCGCGTGTCATGATAAACGCGTGGGCCATAGGGAGGGACAAGAACAGTTGGGAGGAACCCGAAACTTATAAGCCATCACGGTTCATGAAACCGGGTGTGCCCGATTTCAAAGGGAGCAACTTTGAGTTCATTCCATTCGGGTCGGGTCGTAGATCATGCCCCGGGATGCAGTTGGGTCTCTACGCGCTTGACTTGGCGGTGGCTCACCTTCTTCATTGCTTCACGTGGGAGTTACCTGATGGAATGAAACCGAGTGAGATGGATATGAGTGACGTGTTTGGACTCACCGCTCCAAGGGCGAGTCGACTCGTTGCTATACCCACCAAGCGCGTTGTGTGCCCTCTTGATTAG 1575 0.4965 MDSSLKSQTIANLELEPFQMAILFIVPLIVALVLGLISRIRRRAPYPPGPKGLPIIGNMFMMDQLTHRGLANLAKQYGGIFHLRMGFLHMMAISEPDTARQVLQVQDNIFSNRPATIAISYLTYDRADMAFAHYGPFWRQMRKLCVMKLFSRKRAESWQSVRDEVDAAVNTVAANTGKAVNIGELVFNLTKNIIYRAAFGSSSQEGQDEFIGILQEFSKLFGAFNIADFIPFLGAIDPQGLNTRLVKARGALDSFIDKIVDEHVEKKRDLKHDGDEETDMVDELLAFYGDEAKVNNETDDLQNSIRLTKDNIKAIIMDVMFGGTETVASAIEWAMAELMRSPEDLKRVQQELADVVGLARRVEEPDFEKLTYLKCALKETLRLHPPIPLLLHETSEDATVAGYFIPKRARVMINAWAIGRDKNSWEEPETYKPSRFMKPGVPDFKGSNFEFIPFGSGRRSCPGMQLGLYALDLAVAHLLHCFTWELPDGMKPSEMDMSDVFGLTAPRASRLVAIPTKRVVCPLD* 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g01583 524 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 454 463 IPR017972 GO:0005506|GO:0016705
Rops1g01583 524 PRINTS E-class P450 group I signature 461 484 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g01583 524 PRINTS E-class P450 group I signature 414 438 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g01583 524 PRINTS E-class P450 group I signature 451 461 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g01583 524 PRINTS E-class P450 group I signature 331 357 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g01583 524 PRINTS E-class P450 group I signature 74 93 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g01583 524 PRINTS E-class P450 group I signature 98 119 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g01583 524 PRINTS E-class P450 group I signature 189 207 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g01583 524 PRINTS E-class P450 group I signature 374 392 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g01583 524 PRINTS E-class P450 group I signature 311 328 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g01583 524 Gene3D Cytochrome P450 39 517 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g01583 524 PRINTS P450 superfamily signature 375 386 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g01583 524 PRINTS P450 superfamily signature 461 472 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g01583 524 PRINTS P450 superfamily signature 322 339 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g01583 524 PRINTS P450 superfamily signature 452 461 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g01583 524 FunFam Cytochrome P450 84A1 39 517 - -
Rops1g01583 524 SUPERFAMILY Cytochrome P450 40 518 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g01583 524 PANTHER CYTOCHROME P450 84A1-RELATED 18 523 - -
Rops1g01583 524 CDD CYP71-like 76 511 - -
Rops1g01583 524 Pfam Cytochrome P450 47 507 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g01583 Rops-Chr1 33921825 33925108 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops1g01583 54 523 Monolignol Biosynthesis Gene Families AT4G36220 77.167 0.0 778
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g01583 K09755 - gmx:100783430 884.019