Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Rops1g01578 | ATGGAACAACCGAAGCCGGAAACAGCCGCGAGCGTTGGAACTACCGCGGCGGCGGAGGTTTTGAGTAGGGATTTGAAGGATTCGCAGCTAGTTGGAGTACCTGTCTCGTTGGTTGGCGATGTTGACATGGTGGAGAGAAACGGTGGTTGTTGCGCGCCTAATTTGGAGGTCTCCGTTGCAGACGGTGCCGTTTTGAAGAGGAAGCGAGGTCGACCAGCTAAAGGACTTCCGAAAACGACACCTCCACCGAGACAGAAGGAGGACGAAGAAGATGTTTGTTTTATATGCTTTGATGGTGGAAGCCTCGTTCTCTGTGATCGCCGGGGTTGCCCCAAAGCGTATCATCCCACATGTGTCAAGCGAGACGAAGCGTTTTTCCGTTCAAAGGCCAAATGGAATTGCGGTTGGCATGTATGTATCACTTGTCAGAAGGCTTCCCATTATATGTGCTATACTTGTACATATTCTTTGTGCAAGGGATGTATAAAAGATGCTGATTTTGTTTGTGTCCGAGAAAATAAAGGTTTGTGTGCACTGTGCATGAGAACTATAATGCTGATTGAGAACAGTGCCCAGGGAAATAAGGAAATGTGTGAAGTGGATTTTGATGACAAAAGCAGCTGGGAGTATCTTTTTAAGGTTTATTGGATGTATTTGAAAGGGAAGCTATCTTTAACATTTGATGAGCTCCTTAGAGCTAAAAACCCATTCAAAGGTGCTGCTTCTATGAGCAGTAGAGTTCAAACTCCCCATGAACTTTATCATCTTAAAGATGACAAAGGTTCTGGTTCTGAGAACTCCTGTATAGACATAGAATCATATAATTTGAAAAACAAGAAGTCTAAGAGACAGCCAAAGCTTCCTAGCAAGGGGGATTGCTTTGATAGGATTGTTTCAGGTGGTGACACCCATGTGTCTTTGCCTGAATGCACAAAATGGGCATCAAAGGAGCTTATTGAGTTTGTTTCCCATATAAAAAATGGTGATACATCTCTCCTGTCTCAATTTGATGTTCAGAATCTCCTGCTGGAGTATGTCAAGAAAAACAATCTTCGTGATCCTCATCAGAAATCTCAAATTGTTTGTGACTCTAGACTAGTAAATTTGTTTGGTAAAGCACGTCTTGGCTACATTGAAATGCTAATGCTTCTTGAATCCCACTTTCTTATAAAAGAGAATGGTCATGCGGAAAATACTTTTGGAGCAGGAATTATTGATGCTGTTCCTAATGAAGAGGAGGCCATTGACAATTACAATAAACAGTTGATGTTAGTTAATGATAAGAGATGTATAACAAGTAGAAAGGCTGATGTGCTAGTGCCAAAAATTAATCCAGATGCATATGCTGCAATAGATGTTCACAACATTAACTTGATCTACTTGCGGCGAAGTCTTATCGAGAGTCTAACTGATGATACTGAAAAGATTCATGAGAAGGTTGTTGGTTCTTTTGTGCGGATAAGAATCTCTAGTGGTGATCAGAAACAAGATATGTATAGGCTTGTCCAAGTTGTAGGTACAAGCAAAGTTGCTGAACCTTACAAAATTGACACAAGAACAACCGATATTAAGCTTGAAATTTTAAACTTAAACAGGAAGGAGGTCATATCAATAGATGAGATTTCGAATCAGGAGTTCTCTGAGGATGAATGCAAGCGTTTGCGTCAGAGTATAAAATATGGACTCTCAAAGAGATTGACTGTGGGAGAGATTCTGAACAAAGCATTGACGCTTCAAGCAATAAGAGTTAATGATTTGCTGGAAGCTGAGATACTGCGGCTGAATCATCTTCGTGACAGAGCAAGTGAAAAGGGGCATAGAAAAGAGCTTAAAGAATGTGTGGAGGAGTTGCAGCTGCTAAATTCACCAGAGGAACGTCAGCGCAGGCTGCACGAAATTCCGGATGTACACTCTGGAGAGTCCGACGATAATGGTAAAATAAGGTCAAAATATCTCGGATTTGATAGAAGAGAGAGGGGATCTATTTTTCCCAGAATTTGGGATGGTGTCTTGAATGATGTTGGATGCAAAACACAAGACTTGACCAAAACCTGTGATCCAATTGGGAATATGTGCATAATAAAGGATCATATCAACCCTAATGATGCAATTGATGATAACACTAATGTAGTTGTGAAATCAGAAGCATCTAGTATTGCGGTGGACATTTCATCATCGCTTCTCTCTCCAGGGATTGAGCATCCATTTAATGATCCTGTGAATGATAAATCGTGGCATTATCAGGATCCAACTGGGAAAGTTCAAGGACCTTTTTCTATGTTGCAGCTGTATAAGTGGAATGCAAGTGGACATTTCCCTCCAGATCTCAGAATATGGAGGATAGATGAGAAACAAGATAACTCTATATTGTTAACTGATGCTCTTAATGGGAAGTGTTCCAAAAATGTGTCATTGCCCTACAACAGCCAATTGCTCTCTTTAGGGGCCAGTGTTACATTGGATAATAAGGAAAATAGTCAGGATGGTGGGAGGAATGCAACAATGACTGAAATTTCTGCAGACAGCCAAATTATTGAGCAGAGCAGGGAACAAAAAGTGGATGATACCTCTACCCAGATTAATGGTAAAGATGAATCTGTTAGGAGCAATGGATGGTATGACCAGCTGCATCCATACCCTTCACTACCACCAACTTCCATTTCTGAGAAATTGAATGAGAATCCTTCTGATAAATTAAGGGAGGGTCATGGGATTGGGGGAAACTCTGAAGATAATGGAAATTATGGCTCAAACAGGACCTCTGATGGTCAGAGTAATAGTGGGCAAAGTTATCAGAAGCAATCTGATAGTGAAGACAATTCGGGGCAATCTTCTGAACAGAACTGGAGACACCCTAATGTAAATAGTTCTTCCAATTGCTTGGTTACCACGTCACCTCCGGATTCTGGGACAAAAACATCACCACATAAGCTGGGATTTGATTCGCATAGTCCCCCTTCCCCTCCACCGTGTAATACATCAACGTGGCAGGCAATCATTGGTGAACCCGATGATTTTGATGAATCAGTTTCAGATCTGTTGGCAGAAGTGGAGGCAATGGAGTCACTTGGTGGCTTGGAATCTCCCACTTCAATCATGAAGCGTGGTGAGGAATTGACTGATGGTTCTAAAAATGATTGTCTCAGTTTTGCAGAGCTTAGCCCAATGCTTGATGCAGGTAAAGGTGATGCACTGAGCTCCACAGATGATTTACACTTAGCATCTCAATCCACGGCAACAGAGGAACCATTACGGCAGGCAGATGTCCATCATCATCATCAAAAAATATCTAGGGAGCATCCCTCGAGAAGTTCTGAAGTTGAGGAGGGTACAAAGAACATTGGTTATTCAGGTAATCAATGGGAGTCAGGGTCGGAAAATTCATCCATTGTTCCATGCACTGGAACATTGGGCATGGCTACAGACACCACTTGGAGACTCGGGTCAGAGAATACCCACTTGGGGTGGGGTGGAATGGATCAACGAAATGCAAACATTGGTTGGGGAGTAGGGCAGATGGCAGTGCAAGAGAACAGGAGCTCAAATTCTTACACTTCTGCAGTAACTCCAGGCTTTGTGGATAGCCAAACAAGATATGGCAACGATCGATTTCCTGTGCCCAGAGATCGGGGTTTTCATGGTCACAGTAGAGAATCAGGTTTTGGTAGAGGCAGAACTGCATGGAACAGGCAGCCATTATTCGGTGTTGGAAATGGAGGCTCTTATAGGCCTTTGCCCAGAGGGCAGCGGGTTTGTAAATTTTATGAAAGTGGGTACTGCAAGAAGGGAGCATCCTGCGATTACTTACACCCATGA | 3816 | 0.4258 | MEQPKPETAASVGTTAAAEVLSRDLKDSQLVGVPVSLVGDVDMVERNGGCCAPNLEVSVADGAVLKRKRGRPAKGLPKTTPPPRQKEDEEDVCFICFDGGSLVLCDRRGCPKAYHPTCVKRDEAFFRSKAKWNCGWHVCITCQKASHYMCYTCTYSLCKGCIKDADFVCVRENKGLCALCMRTIMLIENSAQGNKEMCEVDFDDKSSWEYLFKVYWMYLKGKLSLTFDELLRAKNPFKGAASMSSRVQTPHELYHLKDDKGSGSENSCIDIESYNLKNKKSKRQPKLPSKGDCFDRIVSGGDTHVSLPECTKWASKELIEFVSHIKNGDTSLLSQFDVQNLLLEYVKKNNLRDPHQKSQIVCDSRLVNLFGKARLGYIEMLMLLESHFLIKENGHAENTFGAGIIDAVPNEEEAIDNYNKQLMLVNDKRCITSRKADVLVPKINPDAYAAIDVHNINLIYLRRSLIESLTDDTEKIHEKVVGSFVRIRISSGDQKQDMYRLVQVVGTSKVAEPYKIDTRTTDIKLEILNLNRKEVISIDEISNQEFSEDECKRLRQSIKYGLSKRLTVGEILNKALTLQAIRVNDLLEAEILRLNHLRDRASEKGHRKELKECVEELQLLNSPEERQRRLHEIPDVHSGESDDNGKIRSKYLGFDRRERGSIFPRIWDGVLNDVGCKTQDLTKTCDPIGNMCIIKDHINPNDAIDDNTNVVVKSEASSIAVDISSSLLSPGIEHPFNDPVNDKSWHYQDPTGKVQGPFSMLQLYKWNASGHFPPDLRIWRIDEKQDNSILLTDALNGKCSKNVSLPYNSQLLSLGASVTLDNKENSQDGGRNATMTEISADSQIIEQSREQKVDDTSTQINGKDESVRSNGWYDQLHPYPSLPPTSISEKLNENPSDKLREGHGIGGNSEDNGNYGSNRTSDGQSNSGQSYQKQSDSEDNSGQSSEQNWRHPNVNSSSNCLVTTSPPDSGTKTSPHKLGFDSHSPPSPPPCNTSTWQAIIGEPDDFDESVSDLLAEVEAMESLGGLESPTSIMKRGEELTDGSKNDCLSFAELSPMLDAGKGDALSSTDDLHLASQSTATEEPLRQADVHHHHQKISREHPSRSSEVEEGTKNIGYSGNQWESGSENSSIVPCTGTLGMATDTTWRLGSENTHLGWGGMDQRNANIGWGVGQMAVQENRSSNSYTSAVTPGFVDSQTRYGNDRFPVPRDRGFHGHSRESGFGRGRTAWNRQPLFGVGNGGSYRPLPRGQRVCKFYESGYCKKGASCDYLHP* | 1272 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Rops1g01578 | 1271 | MobiDBLite | consensus disorder prediction | 1061 | 1128 | - | - | |
| Rops1g01578 | 1271 | Pfam | Plus-3 domain | 455 | 558 | IPR004343 | GO:0003677 | |
| Rops1g01578 | 1271 | CDD | SWIB-MDM2_like | 313 | 388 | - | - | |
| Rops1g01578 | 1271 | ProSiteProfiles | Zinc finger PHD-type profile. | 90 | 156 | IPR019787 | - | |
| Rops1g01578 | 1271 | ProSiteProfiles | Plus3 domain profile. | 450 | 583 | IPR004343 | GO:0003677 | |
| Rops1g01578 | 1271 | CDD | GYF | 742 | 797 | IPR003169 | GO:0005515 | |
| Rops1g01578 | 1271 | Gene3D | - | 744 | 800 | IPR035445 | - | |
| Rops1g01578 | 1271 | MobiDBLite | consensus disorder prediction | 1069 | 1083 | - | - | |
| Rops1g01578 | 1271 | FunFam | Zinc finger CCCH domain-containing protein 19 | 83 | 182 | - | - | |
| Rops1g01578 | 1271 | SUPERFAMILY | FYVE/PHD zinc finger | 74 | 138 | IPR011011 | - |
Showing 1 to 10 of 38 entries
Duplication type information
Functional genes information
Transcription factors information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Rops1g01578 | - | - | aprc:113869503 | 2123.59 |
Showing 1 to 1 of 1 entries