Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g01556 ATGGCCATAAAAAAATCCAATAAACTACCACAAGCTGTTGTTCTCAAGCAAATTCTCAAAAGGTGCTCAAGTTTTGGAAAGAAGCAGAGCTACAATGAAGAGGGTCTTCCTGATGATGTACCAAAAGGCCATTTTGCAGTCTATGTTGGGGAGAATAGGACCAGATACATTATCCCAATTTCATGGCTGGCTCACCCTCAGTTTCAAAGTCTGCTCCAAAGAGCTGAGGAGGAGTTTGGCTTCAATCATGATATGGGACTTACCATCCCCTGTGATGAAGTTGCTTTTGAGTCCCTAATCTCAATGATGGGATAA 315 0.4222 MAIKKSNKLPQAVVLKQILKRCSSFGKKQSYNEEGLPDDVPKGHFAVYVGENRTRYIIPISWLAHPQFQSLLQRAEEEFGFNHDMGLTIPCDEVAFESLISMMG* 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g01556 104 Pfam Auxin responsive protein 17 103 IPR003676 GO:0009733
Rops1g01556 104 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 26 99 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g01556 Rops-Chr1 33574949 33575263 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops1g01556 5 103 Calmodulin-binding Proteins AT4G34750 44.444 8.67e-23 84.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g01556 K14488 - gmx:100798840 205.682