Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Rops1g01547 | ATGGGTATCTGTTTTTCCTCCACCAAGGTCAGCGGTTCTAACAGCAACAACATCGACGCCGCCAATCGGAAACGGAGCTCGAAACAGCAGCAACCCGCGACGGCGGTGCAGAAGCAACAAGCGTCAACCGGTCAACGTCAGAGAGCGTCGGAAGAGGCACAGAAGAAGCAGTCGAAGAATTCGCAGCAGCAACAGCAAAGGCCCAAAGAGAAAACGACGTCGCGGCGACAAGGGGGGCATTTACCCTGTGGAAAGAGAACGGATTTCGGTTACGAGAAGGACTTTGATAAGAGATTCTCCCTCGGTAAATTGTTGGGGCATGGCCAATTCGGTTACACCTATGTTGGAACTGATAAAAGGAATGGGGATCGTGTGGCTGTGAAGAGACTCGAGAAGAGCAAGATGGTTCTTCCCATAGCTGTTGAGGATGTTAAGAGAGAGGTCAAGATATTGAAAGAACTTGCAGGCCATGAAAATGTGGTTCAGTTCTATCATGCTTTTGAGGATGATTCATACGTGTACATAGTTATGGAGTTATGCGAGGGTGGAGAATTGCTAGATCGGATATTGGCCAAGAAGGACAGCCGATATACTGAAAAAGATGCAGCAGTGGTTGTAAGGCAGATGCTTAAGGTTGCGGCTGAGTGTCATTTACATGGTTTGGTACATCGGGACATGAAGCCAGAGAATTTTCTTTTCAAATCAACCAGAGAAGATTCACCTTTAAAGGCTACTGATTTTGGTTTGTCTGATTTCATAAAACCTGGAAAAAGGTTTCAAGATATTGTTGGAAGTGCTTACTATGTTGCACCAGAAGTGTTAAAACGGAAGTCAGGCCCTGAATCAGATGTATGGAGTATTGGTGTGATTACATACATATTGCTTTGTGGGAGACGCCCATTTTGGGATAAGACCGAGGATGGTATCTTCAAGGAGGTCTTACGGAACAAGCCTGATTTCCGGCGGAAACCATGGCCAACCATAAGTACTGCTGCAAAAGATTTTGTGAAGAAATTGTTGGTAAAAGATCCACGGGCAAGATTAACTGCTGCTCAGGCTCTATCACATCCATGGGTTAGAGAAGGAGGAGAGGCATTGGAGATTCCTATTGATATATCTGTCCTGAACAACATGCGACAGTTTGTGAAGTATAGTCGATTGAAACAATTTGCACTGAGGGCATTGGCAAGCACACTTAATGAAGATGAGTTGTCTGATCTAAAAGATCAGTTTGATGCAATCGATGTGGACAAAAATGGTTCTATTAGTCTTGAAGAGATGAGACAGGCTCTTGCGAAAGATCTCCCTTGGAAATTGAAAGAATCACGTGTACTAGAGATATTGCAAGCGATAGACAGTAACACAGATGGGTTAGTGGATTTCACCGAGTTTGTGGCAGCTACATTACATGTGCATCAACTGGAGGAACATGACTCGGAGAAGTGGCAGCTACGGTCACAGTCTGCTTTTGAGAAATTTGACTTGGATAAGGATGGCTATATTACTCCAGATGAACTCAGAATGCATACTGGTTTAAGAGGCTCCATTGATCCATTGCTTGAGGAAGCTGATATTGACAAAGATGGAAAAATTAGCTTACCAGAATTTCGTAGACTTCTAAGAACTGCAAGCATTTCTCGAAATGTCACAAGCCCAACTCAGCGTTTACGGAAGATCTAA | 1680 | 0.4417 | MGICFSSTKVSGSNSNNIDAANRKRSSKQQQPATAVQKQQASTGQRQRASEEAQKKQSKNSQQQQQRPKEKTTSRRQGGHLPCGKRTDFGYEKDFDKRFSLGKLLGHGQFGYTYVGTDKRNGDRVAVKRLEKSKMVLPIAVEDVKREVKILKELAGHENVVQFYHAFEDDSYVYIVMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLKVAAECHLHGLVHRDMKPENFLFKSTREDSPLKATDFGLSDFIKPGKRFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPTISTAAKDFVKKLLVKDPRARLTAAQALSHPWVREGGEALEIPIDISVLNNMRQFVKYSRLKQFALRALASTLNEDELSDLKDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDSNTDGLVDFTEFVAATLHVHQLEEHDSEKWQLRSQSAFEKFDLDKDGYITPDELRMHTGLRGSIDPLLEEADIDKDGKISLPEFRRLLRTASISRNVTSPTQRLRKI* | 560 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Rops1g01547 | 559 | ProSitePatterns | Protein kinases ATP-binding region signature. | 105 | 128 | IPR017441 | GO:0005524 | |
Rops1g01547 | 559 | ProSitePatterns | EF-hand calcium-binding domain. | 494 | 506 | IPR018247 | - | |
Rops1g01547 | 559 | Gene3D | - | 400 | 469 | - | - | |
Rops1g01547 | 559 | SUPERFAMILY | Protein kinase-like (PK-like) | 96 | 371 | IPR011009 | - | |
Rops1g01547 | 559 | MobiDBLite | consensus disorder prediction | 1 | 48 | - | - | |
Rops1g01547 | 559 | Gene3D | - | 380 | 539 | - | - | |
Rops1g01547 | 559 | Gene3D | Transferase(Phosphotransferase) domain 1 | 182 | 379 | - | - | |
Rops1g01547 | 559 | FunFam | Calcium-dependent protein kinase 28 | 400 | 469 | - | - | |
Rops1g01547 | 559 | Pfam | EF-hand domain pair | 488 | 540 | IPR002048 | GO:0005509 | |
Rops1g01547 | 559 | Pfam | EF-hand domain pair | 405 | 468 | IPR002048 | GO:0005509 | |
Rops1g01547 | 559 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 221 | 233 | IPR008271 | GO:0004672|GO:0006468 | |
Rops1g01547 | 559 | ProSiteProfiles | EF-hand calcium-binding domain profile. | 439 | 474 | IPR002048 | GO:0005509 | |
Rops1g01547 | 559 | ProSitePatterns | EF-hand calcium-binding domain. | 415 | 427 | IPR018247 | - | |
Rops1g01547 | 559 | SUPERFAMILY | EF-hand | 391 | 546 | IPR011992 | - | |
Rops1g01547 | 559 | Gene3D | Phosphorylase Kinase; domain 1 | 95 | 181 | - | - | |
Rops1g01547 | 559 | CDD | STKc_CAMK | 98 | 358 | - | - | |
Rops1g01547 | 559 | ProSitePatterns | EF-hand calcium-binding domain. | 452 | 464 | IPR018247 | - | |
Rops1g01547 | 559 | ProSiteProfiles | EF-hand calcium-binding domain profile. | 402 | 437 | IPR002048 | GO:0005509 | |
Rops1g01547 | 559 | SMART | efh_1 | 515 | 543 | IPR002048 | GO:0005509 | |
Rops1g01547 | 559 | SMART | efh_1 | 406 | 434 | IPR002048 | GO:0005509 | |
Rops1g01547 | 559 | SMART | efh_1 | 443 | 471 | IPR002048 | GO:0005509 | |
Rops1g01547 | 559 | SMART | efh_1 | 485 | 513 | IPR002048 | GO:0005509 | |
Rops1g01547 | 559 | ProSitePatterns | EF-hand calcium-binding domain. | 524 | 536 | IPR018247 | - | |
Rops1g01547 | 559 | ProSiteProfiles | Protein kinase domain profile. | 99 | 359 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Rops1g01547 | 559 | FunFam | CDPK-related kinase 1 | 92 | 184 | - | - | |
Rops1g01547 | 559 | ProSiteProfiles | EF-hand calcium-binding domain profile. | 481 | 516 | IPR002048 | GO:0005509 | |
Rops1g01547 | 559 | MobiDBLite | consensus disorder prediction | 1 | 87 | - | - | |
Rops1g01547 | 559 | PANTHER | SERINE/THREONINE-PROTEIN KINASE | 71 | 528 | - | - | |
Rops1g01547 | 559 | FunFam | calcium-dependent protein kinase 28-like | 185 | 378 | - | - | |
Rops1g01547 | 559 | SMART | serkin_6 | 99 | 359 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Rops1g01547 | 559 | Pfam | Protein kinase domain | 101 | 359 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Rops1g01547 | 559 | ProSiteProfiles | EF-hand calcium-binding domain profile. | 519 | 546 | IPR002048 | GO:0005509 | |
Rops1g01547 | 559 | Coils | Coil | 46 | 66 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Rops1g01547 | Rops-Chr1 | 33368631 | 33374136 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Rops1g01547 | 1 | 556 | EF-hand Containing Proteins | AT2G17890 | 75.218 | 0.0 | 869 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | CAMK_CDPK | Rops1g01547 | Pkinase | 8.4e-69 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Rops1g01547 | K13412 | - | gmx:100805954 | 957.592 |