Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g01539 ATGTTGTTATTCCCTAGGTTTGTAGGTGGAAAATGGCTAGGATTTGTCACAGCCATATGGGTTCAAGCAATCTGTGGAAACAACTATACTTTTGCCAACTATTCTGATGTATTGAAGAGTCTAATGGCTCTGACCCAGATGCAGCTTAACAATCTCTCAGTTGCTAAAGATGTTGGCAAGGCTTTTGGTGTTTTATCTGGTCTTGCCTCTGATCGTTGGTCAACTTCAGTTATACTCATGATTGGAGCCATCATGGGATTCATAGGCTATGGTGTTCAATGGCTTGTTGTTAGCCAAAGAATCAGTCCACTCCCTTATTGGCTGATGTGTATATTCTTGTGTATGGGGGGGAACAGCACAACCTGGATGAACACAGCAGTGCTTGTGACTTGTATGAGGAATTTTCCACAGAACCGTGGTCCAATTTCTGGTATTCTCAAGGGTTATGTGGGACTCAGCACAGCAATATTCACAGACATATGCACTGCCTTGTTTTCCTCAGACCCATCTAAGTTTCTGCTAATGCTTACCATTGTTCCTGCTGTCATTTGCCTTATTGCTGCTCTTTTCCTTCATGAGACCCCACCAGCTTCCACATCTTCAGAGGAAAAGCAAGAAACCCAATTCTTCAATATATTCAACTTGATTGCAGTTACAGTAGCTGTCTATCTCTTGGTCTTTGACATCTCTGGACCTCACAACCAGGTTCTATCCTTGGTTTTCACAGCAGGGCTTCTTATCCTGTTAGCCATGCCACTTCTTGTCCCTTTATACTTGGCCATCTTCAAATCAAGTCCTATTCTTGACAGAGAAAAACAGGTTCGTGAACCATTGCTTGCTCAAAAAATTTCAGCAGAAAAGGAAGAGAGGCAGGATCATGAAGTAAGTGAAGGCACCAAAGTGGAGGAAAATGAAACAAAACAAAAACCCGTGATAGGGGAGGAGCATACCATCATTGAAATGGTAAAAACTGTTGATTTCTGGGTTTTATTTGTGTCATTTCTTTGTGGTGTGGGAACAGGACTCTGTGTGATGAATAACATGGGACAAATGGGACTAGCACTTGGTTACCATGATGTTTCTATATTCATTTCCTTCATTAGCATATGGGGTTTCTTTGGACGCATTATTTCTGGCTCTCTTTCAGAATACTACATCAGAAAATCAGCCATGCCAAGGCTAGTTTGGAATGCTGCTTCTCAAATTCTGATGGCTATTGGTTACATTGCAATGGCCATGGCCTTGCCAGGATCACTTTATCTTGGTTCAATGTTGGTGGGAATATGCTATGGAGTACGTCTTACTATAACCCCAGCAGCAGCCTCAGAGCTGTTTGGCCTAAAATACTATGGTTTATTATACAACATCCTCATTCTCAACCTTCCTATTGGTTCCATCCTCTTTTCTGGTCTCATTGCTGGTTATCTTTATGATGTTGAAGCCACCAGTGTGCCTGGTGGGGGAAACACTTGCATTGGAGCACATTGTTACATGCTTGTGTATGCGATTATGGCCTTTACTTGTGTCCTGGGATGTGGATTGGACCTGCTGCTGTCAGTTAGAACAAAGAAGATCTATTCCAAGATCCACCTAGAGAGAAGTCTCAATTCCCCAAGTGCTACACTGAGATGA 1632 0.4246 MLLFPRFVGGKWLGFVTAIWVQAICGNNYTFANYSDVLKSLMALTQMQLNNLSVAKDVGKAFGVLSGLASDRWSTSVILMIGAIMGFIGYGVQWLVVSQRISPLPYWLMCIFLCMGGNSTTWMNTAVLVTCMRNFPQNRGPISGILKGYVGLSTAIFTDICTALFSSDPSKFLLMLTIVPAVICLIAALFLHETPPASTSSEEKQETQFFNIFNLIAVTVAVYLLVFDISGPHNQVLSLVFTAGLLILLAMPLLVPLYLAIFKSSPILDREKQVREPLLAQKISAEKEERQDHEVSEGTKVEENETKQKPVIGEEHTIIEMVKTVDFWVLFVSFLCGVGTGLCVMNNMGQMGLALGYHDVSIFISFISIWGFFGRIISGSLSEYYIRKSAMPRLVWNAASQILMAIGYIAMAMALPGSLYLGSMLVGICYGVRLTITPAAASELFGLKYYGLLYNILILNLPIGSILFSGLIAGYLYDVEATSVPGGGNTCIGAHCYMLVYAIMAFTCVLGCGLDLLLSVRTKKIYSKIHLERSLNSPSATLR* 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g01539 543 MobiDBLite consensus disorder prediction 286 306 - -
Rops1g01539 543 SUPERFAMILY MFS general substrate transporter 27 524 IPR036259 -
Rops1g01539 543 CDD MFS_Mch1p_like 10 512 - -
Rops1g01539 543 Pfam Nodulin-like 11 257 IPR010658 -
Rops1g01539 543 Gene3D MFS general substrate transporter like domains 11 205 IPR036259 -
Rops1g01539 543 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 12 527 - -
Rops1g01539 543 Gene3D MFS general substrate transporter like domains 321 526 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g01539 Rops-Chr1 33167797 33169665 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops1g01539 11 543 Nodulin-like Gene Family AT4G34950 62.862 0.0 720
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g01539 - - cit:102624072 755.747