Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g01532 ATGGAGGAAGAAAATGGAGAAGGAAGATCCTTGGCTGAAACCCCCACTTGGGCTGTGGCAACTGTCATCACTCTCTTGGTTTCTCTTAGTTTCTTGTCTAATGGCACATTAAAAAAATTGGTTAAGTGGTTGGATAGAACTAAGAGAAAATCTCTTCTTTCTGCTCTGGAAAAGATCCAAGAAGAACTAATGCTTTTTGGGCTTCTGTCATTGCTGATGGGTCATTGGATTATTTTTGTGGCAAAGATTTGTGTTAAGTCATCAGTGTTAAGCAGCAGATTTTTTCCATGTGCCATGGAAAAGAATTTTGGAAAAGTGGAAAGTATTTTGTGGTCTGATTCAGAATATTCAAATAAAACATTTCTCAGAGAGCAAGTGAACAATGGCCTGCATAATTATTGTGCTGAGGGTCACGAATCATTGGCTTCTTATGAAAGCCTTGAGCAGCTTCATCGCTTTGTGTTGGTTCTTGGGATCACTCATGTTTCCTATAGCTTTGTTGCTGTTGCCCTGGCCATGATCAAGATACATAGCTGGAGAACGTGGGAAAATGAAGCGAAGACTATTGCTGTACAACAAAGCTTACAAGGTACCGCACAAAGTACATCAAGCATAAGACTGACACGGCTTAGTACATTCATCTGTCACCACACATCCCATCCTTGGAGTCATCACAAAATTCTTGTTTGGCTGCTATGTTTCAGCCGCCAATTCTGGAGTTCCATCAACAGAGCTGATTACATGGCATTGCGCTTAGGCTTCATTACCAATCATGACCTTCCCCTAACATATGATTTCCACAATTATATGCTTCGAAGCATGGATGATGAATTTCGTGACATCATTGGTGTTAGTGTGCCTCTCTGGATATATGCCATATGCTGTATTTTTCTAAATTTTCATGGAAGCAACTTTTACTTTTGGCTTTCCTTTGTTCCAGCAATTTTAATCCTCATAATTGGCACTAAATTGCACCGAGTGGTGGTAAAGTTGGCTGTTGAAATAGTAGATCGTTGTCCATATATGAAACCTCATCAATTTAACTTAAGAGATGAGCTCTTCTGGTTTGGAAAGCCTAGGCTTCTGTTGCGGTTAATACAATTGATATCCTTCTTGAATGCATTTGAAATGTCAACATTCTTATGGTCCCTGTGGGAAATTAAAGATCCTGCTTGTTTCATGAACAACCGAACATTTATTGTGATCCGCTTGTCATTCGGGGTCGTTTCTCAAGTCTGGTGCAGCTTTATAACGTTTCCTCTCTATGTTATCATCACACAGATGGGCTCAAAATTCAAAAAGTCTGTGATATCTGAAAATGTAAGAAAATCACTCTCGAAATGGCAGAGAAGAGTGAAGGCCAAACAAAGTTCCTCTTATACACTCCTTACTGCAACATCAACATCATCATTGGAGTCTATGCTGTATGGAGTGGACAATTCAAATTCCCATGCCTCAATCAGTGAGGAAGGAAGTTCCTCAGGAACTAAAGATATCTGTCTCTCTAATCTTGATGATGTGTCAAAGACTCAAAGCAATGCGCCATTTCCAAGTTGA 1557 0.3982 MEEENGEGRSLAETPTWAVATVITLLVSLSFLSNGTLKKLVKWLDRTKRKSLLSALEKIQEELMLFGLLSLLMGHWIIFVAKICVKSSVLSSRFFPCAMEKNFGKVESILWSDSEYSNKTFLREQVNNGLHNYCAEGHESLASYESLEQLHRFVLVLGITHVSYSFVAVALAMIKIHSWRTWENEAKTIAVQQSLQGTAQSTSSIRLTRLSTFICHHTSHPWSHHKILVWLLCFSRQFWSSINRADYMALRLGFITNHDLPLTYDFHNYMLRSMDDEFRDIIGVSVPLWIYAICCIFLNFHGSNFYFWLSFVPAILILIIGTKLHRVVVKLAVEIVDRCPYMKPHQFNLRDELFWFGKPRLLLRLIQLISFLNAFEMSTFLWSLWEIKDPACFMNNRTFIVIRLSFGVVSQVWCSFITFPLYVIITQMGSKFKKSVISENVRKSLSKWQRRVKAKQSSSYTLLTATSTSSLESMLYGVDNSNSHASISEEGSSSGTKDICLSNLDDVSKTQSNAPFPS* 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g01532 518 PANTHER MLO-LIKE PROTEIN 1 7 492 IPR004326 GO:0006952|GO:0016020
Rops1g01532 518 Pfam Mlo family 9 472 IPR004326 GO:0006952|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g01532 Rops-Chr1 33047966 33052773 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops1g01532 1 507 MLO family AT1G11000 47.255 1.54e-156 456
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g01532 K08472 - gmx:100807014 853.973