Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g01531 ATGCATAAGACTCGGAGCGACCCGGAGAGACTCGGCGGTTGGATCGCAAAACCGGTGACCCAGACAGTTCTTAGTGAACCGGACGGCATCCCACCACAGCCTCTCAAAGCCCTAGCGTCACATCTCCTCCACGGTGAAGCCTTTCACGTCCCATCTCCGGCGACCATTGAAGCCCCTTCGTTGCAGATCTGTTTCGTTGTTTGTTGCAGCAGGCCCACCGCAGCTCCACCAGCAGCACCAACATCCTGCCGCAGGCCCACCGCAGCTCCACCACAACATCCCACCGCACCCATAGCATCCTACCGTACCACCACCGCAGGCCCACTCAGCTCCACCGCACATCACCAGCATCCCACCGCAGTACCACCAGCTCCGTCTCACAGCCCCACCACCGCAACCCCATCAAAGATGCAGCTTAACAATCTCTCAGTTGCTAAAGATGTTGACAAGGCTTTTGGTGTTTTATCTGGTCTTGCCTCTGATCGTTGGCCAACTTCAGTTATACTCATTATTGGAGCCATCATGGGATTCATAGGCTATGGTGTTCAATGGCTTGTTGTTAGCCAAAGAATTAGTCCACTCCCTTATTGGCTGATGTCTATATTCTTGTGTATGGGGGGAAACAACACAACTTGGATGAACACAGCAGTGCTTGTGACTTGTATGAGGAATTTTCCACAGAACCGTGGTCCAATTTCTGGTATTCTCAAGGGTTATGTGGGACTCAGCACAACAATCTTCACAGACATATGCACTGCCTTGTTTTCCTCAGACCCATCTAAGTTTCAGCTAATGCTTACCATTGTTCATGCTGTCATTTGCCTTATTGCTGCTCTTTTCCTTCATGAAACCCCACCAGCTTCCACTTCTTCAGAGGAAAAGCAAGAAACCCAATTCTTCAATATATTCAACTTGATTGCAGTTACAGTAGCTGTCTATCTCTTGGTCTTTGACATCTCTGGACCTCTCAACCATGTTCTATCCTTGGTTTTCACAGCAGGACTTCTTATCCTGTTAGCCATGCCACTTCTTGTCCCTTTATACTTGGCCATCTTCAAATCAAGTCCTATTCTTGACAGAGAAAAACAGGTTCATGAACCATTGCTTGCTCAAAAAATTTCAGCAGAAAAGGAAGAGAGGCAGGATCATGAAGTAAGTGAAGGCACCAAAGAGGAAAATGAAACAAAACGAAAACCCATGATAGGGGAGGAGCATACCATCATTGAAAGGGTTAAAACCGTTGATTTCTGGGTTTTATTTGTGTCATTTCTTTGTGGTGTGGGTACATCACTCTGTGTGATGAATAAATCAAGTGCCTCAGATTTACAAACCTATTCTAAAAGACAACATCAACAAAAAAACGTTTCATTTACCCCATCTCAAAGCAAGCTATACCTATAA 1401 0.464 MHKTRSDPERLGGWIAKPVTQTVLSEPDGIPPQPLKALASHLLHGEAFHVPSPATIEAPSLQICFVVCCSRPTAAPPAAPTSCRRPTAAPPQHPTAPIASYRTTTAGPLSSTAHHQHPTAVPPAPSHSPTTATPSKMQLNNLSVAKDVDKAFGVLSGLASDRWPTSVILIIGAIMGFIGYGVQWLVVSQRISPLPYWLMSIFLCMGGNNTTWMNTAVLVTCMRNFPQNRGPISGILKGYVGLSTTIFTDICTALFSSDPSKFQLMLTIVHAVICLIAALFLHETPPASTSSEEKQETQFFNIFNLIAVTVAVYLLVFDISGPLNHVLSLVFTAGLLILLAMPLLVPLYLAIFKSSPILDREKQVHEPLLAQKISAEKEERQDHEVSEGTKEENETKRKPMIGEEHTIIERVKTVDFWVLFVSFLCGVGTSLCVMNKSSASDLQTYSKRQHQQKNVSFTPSQSKLYL* 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g01531 466 Gene3D MFS general substrate transporter like domains 151 295 IPR036259 -
Rops1g01531 466 SUPERFAMILY MFS general substrate transporter 152 289 IPR036259 -
Rops1g01531 466 MobiDBLite consensus disorder prediction 376 398 - -
Rops1g01531 466 MobiDBLite consensus disorder prediction 97 117 - -
Rops1g01531 466 MobiDBLite consensus disorder prediction 76 135 - -
Rops1g01531 466 Pfam Nodulin-like 135 347 IPR010658 -
Rops1g01531 466 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 135 438 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g01531 Rops-Chr1 33044155 33045278 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops1g01531 143 436 Nodulin-like Gene Family AT2G16660 58.784 4.32e-117 347
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g01531 - - rcu:8260661 412.92