Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g01528 ATGGCGAAGGATGCCGTTCATTCCACAAACCCTTTGGAACAGGGTAATTCAAACCCTCCTTCTCCAAACCAATCTGACAGACAAAATGTCAGTCAATGCTCTGATGATGATAGCTATGACAAGCTTATGCTTGCTGTTACAAGGTTGTATTCTCTATACACTTCCCCTAGATCCCTCATGAAGCTTTCTTCACGGAAAGGCTTCTCAGTGTCTTTACGAGAGTCTGATGTGGTGTTAGTACATCGCGCCGAGGAAACGATAAGTCAGAGGAAGCCGGCAGAGGACCCTTCAGACTTTACCTATGTGTACGAGATATACTTCACCCTTCTGAAGCTGAGACTACCCTTTAGTTCCTTCGAATGTGAACTTCTCATATTCATGAATGTCGCCCCTAGCCAGTTGCATCCTAATACTCGGGGCTTCATTCGTTGCTTTGGCCTCTTATGCCATAACTTGAATATCACCCCAACCGTCAACATCTTTTTTCCATTTTTCAATTCAAATCAAATCGTCGCTCACCTTGGATATACATTGATTGGTTTGGAGAAGGAGGGTTTGAATTACCCTATTCCAAAGGGTTTGTGGAATGAACGGCATCCTTCGCCATGCTCAGGAGCAAAAGTTGTCACCATTGATGTACATGCAGCCAAGCGTCTGATCCAGACCGGCTACATTTATTTGGATGTTAGGACGGTGAAAGAGTTTGTGAAAGAGTTTGTGAAAGTGCGTGTGGATGCAGCTGGGATCATTAACATTCCTTACATGTTAGATACAGCCAAGGGCAGGGTGAAGAACCCAGACTTTCTGAAGCAGGTTTCTTCTGCTTGCAACAAAGAAGATCATCTGATCGTGGGTTGCCAAAGTGGGGTGAGATCTCTGTATGCAACTGCTGATCTTCTAGCTGATGATAGCAGTCATGGGGAAGAAAATGGAGAAGGAAGATCCTTGGCTGAAACCCCCACTTGGGCTGTGGCAACTGTCATCACTCTCTTGGTTTCTCTTAGTTTCTTGTCTAATGGCACATTAAAAAAATTGGTTAAGTGGTTGGACAGAACTAGGAGAAAATCTCTTCTTTCTGCTCTGGAAAAGATCCAAGAAGAACTAATGCTTTTTGGGCTTCTGTCATTGCTGATGGGTCATTGGATTATTTTTGTGGCAAAGATTTGTGTTAAGTCATCAGTGTTAAGCAGCAGATTTTTTCCATGTGCAATGGAAAAGAATTTTGGAAAAGTGGGACGTATTTTGTGGTCTAATTCAGAATATTCAAATAAAACAGTTCTTAGAGAGCAAGTGAAGAATGGCCTCCATAATTATTGTCCTGAGGGTCACGAATCATTGCCTTCTTATGAAAGCCTTGAGCAGCTTCATCGCTTTGTGTTGGTTCTTGGGATCACTCATGTTTCCTATAGCTTTGTTGCTGTTGCCCTGGCCATGATCAAGATACATAGCTGGAGAACGTGGGAAAATGAAGCGAAGACTATTCTTTGCATACAACAAAGCTTACAAGGTACCGCACAAAGTACATCAAGCATAAGACTGACACGGCTTAGTACATTCATCTGTCACCACACATCCCATCCTTGGAGTGATCACAAAATTCTTGTTTGGCTGCTATGTTTCAGCCGCCAATTCTGGAGTTCCATCAACAGAGCTGATTACATGGCATTGCGCTTTGGCTTCATTACCAATCATGACCTTCCCCTAACATATGATTTCCACAATTATATGCTTCGAAGCATGGATGATGAATTTCGTGACATCATTGGTGTTAGTGTGCCTCTCTGGATATATGCTATATGCTGTATTTTTCTAAATTTTCATGGAAGCAACTTTTACTTTTGGCTTTCCTTTGTTCCAGCAATTTTGATCCTCATAATTGGCACTAAATTGCATCGTGTGGTGGTAAAGTTGGCTGTTGAAATAGTAGATCTTTGTCCATATATGAAACCTCATCAATTTAACTTAAGAGATGAGCTCTTCTGGTTTGGAAAGCCTAGGCTTCTGTTGCGGTTAATACAATTGATATCCTTTTTGTGGGAAATTAAAGATCCTGCTTGCTTCATGAACAACCGAACATTTATTGTGATCCGCTTGTCATTCGGGGTCGTTTCCCAAGTCTGGTGCAGCTTTATAACGTTTCCTCTCTATGTTATCATCACACAGATGGGCTCAAAGTTCAAAAAGTCTGTGATATCTGAAAATGTAAGAAAATCACTCTCTAAATGGCAGAGAAGGGTGAAGGCCAAACAAAGTTCCTCTTATACACTCCTTACTGCAACATCAACATCATCATTGGAGTCTATGTTGTATGGAATGGACAGTTCAAATTCCCATGCCTCAATCAGTGAGGAAGGAAGTTCCTCAGGAACCAAAGATATTTGTCTCTCTAATCTTGATGATGTGTCAAAGACTCAAAGCAATGCACCATTGCCAAGTTGTGAAGATCATCATGATCATGATGTAAAATATGATTTGTCTCCTCCTCCATTGTCTTGA 2496 0.4159 MAKDAVHSTNPLEQGNSNPPSPNQSDRQNVSQCSDDDSYDKLMLAVTRLYSLYTSPRSLMKLSSRKGFSVSLRESDVVLVHRAEETISQRKPAEDPSDFTYVYEIYFTLLKLRLPFSSFECELLIFMNVAPSQLHPNTRGFIRCFGLLCHNLNITPTVNIFFPFFNSNQIVAHLGYTLIGLEKEGLNYPIPKGLWNERHPSPCSGAKVVTIDVHAAKRLIQTGYIYLDVRTVKEFVKEFVKVRVDAAGIINIPYMLDTAKGRVKNPDFLKQVSSACNKEDHLIVGCQSGVRSLYATADLLADDSSHGEENGEGRSLAETPTWAVATVITLLVSLSFLSNGTLKKLVKWLDRTRRKSLLSALEKIQEELMLFGLLSLLMGHWIIFVAKICVKSSVLSSRFFPCAMEKNFGKVGRILWSNSEYSNKTVLREQVKNGLHNYCPEGHESLPSYESLEQLHRFVLVLGITHVSYSFVAVALAMIKIHSWRTWENEAKTILCIQQSLQGTAQSTSSIRLTRLSTFICHHTSHPWSDHKILVWLLCFSRQFWSSINRADYMALRFGFITNHDLPLTYDFHNYMLRSMDDEFRDIIGVSVPLWIYAICCIFLNFHGSNFYFWLSFVPAILILIIGTKLHRVVVKLAVEIVDLCPYMKPHQFNLRDELFWFGKPRLLLRLIQLISFLWEIKDPACFMNNRTFIVIRLSFGVVSQVWCSFITFPLYVIITQMGSKFKKSVISENVRKSLSKWQRRVKAKQSSSYTLLTATSTSSLESMLYGMDSSNSHASISEEGSSSGTKDICLSNLDDVSKTQSNAPLPSCEDHHDHDVKYDLSPPPLS* 832
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g01528 831 CDD RHOD 215 301 - -
Rops1g01528 831 Pfam Putative gypsy type transposon 108 166 - -
Rops1g01528 831 Gene3D - 198 303 IPR036873 -
Rops1g01528 831 PANTHER MLO-LIKE PROTEIN 1 312 791 IPR004326 GO:0006952|GO:0016020
Rops1g01528 831 MobiDBLite consensus disorder prediction 9 35 - -
Rops1g01528 831 Pfam Mlo family 314 767 IPR004326 GO:0006952|GO:0016020
Rops1g01528 831 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 207 300 IPR036873 -
Rops1g01528 831 ProSiteProfiles Rhodanese domain profile. 220 301 IPR001763 -
Rops1g01528 831 MobiDBLite consensus disorder prediction 803 831 - -
Rops1g01528 831 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g01528 Rops-Chr1 32979404 32997878 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops1g01528 312 831 MLO family AT1G11000 44.669 7.02e-141 427