Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g01513 ATGAAGTTTTTCTTTCAAGAGGTTCTTTTTCAATTGTCTCTTATCATTCTATGGTGTCTTTCCGTAACTATCATCTTTCAACAATATGGTTGTGCAGTGAGTCTCTCATGCAATGAAACTGTCCCAGCAGTCATTGTATTTGGAGACTCTATAGTTGATCCGGGTAACAATAACTACATCAGCACTATTATTAAGTGTAATTTTTTACCATATGGTAGAGAATTTGCTGGAGGAAATAAACCCACTGGAAGGTTCAGCAATGGTTTAGTTCCATCTGACATCATTGCTGCAAAATTTGGAGTCAAGAAGCTTTTGCCAGCTTATCTTGATCCAAATCTGCAACTTCAGGATCTCCTCACAGGCGTAAGCTTTGCCTCTGGTGGTGCTGGATATGATCCTCTAACTTCTGAATTAGTGTCTGTGATATCATTATCAGATCAATTGGACATGTTTAGGGAGTACAAAAAGAAGATGAAGGAAGCAGTTGGAGAAATTAGAACGGCAATAATAATATCAAAGAGCATATACATAGTATGCATAGGAAGTGATGACATTGCCAACACTTACGCTCAAACACCAATTAGGCGAGCACACTACGACATTTCTTCATACACAGACTTAATGGTTTCTCAAGCCTCAAACTTTGTGCAGGAACTTTATGGATTAGGAGCTAGAAGGATTGGAGTAATAGGTTTGCCACCCATAGGATGCCTGCCCTCACAGAGAACAATTGGTGGAGGCATACAGAGAGCATGTTCAGATTCCGAAAACCAAGCAGCAATCCTGTTCAACACCAAGCTCTTATCTCAAATAGATGCCCTTAAAAAACAGTTTTCAGAGGCTAGGCTTGTCTACCTTGATATTTATAACCCAATTCTGTATATCATTCAAAACCCTGCTATATATGGTTTTGAAGTAACAGACAGAGGATGCTGTGGCACAGGAAACATAGAAGTAAGCATATTGTGCAACCGTTACAGCCAAAACACGTGTTCAAACTCCTCAAGCTACATATTCTGGGACAGTTACCATCCTACGGAAGAGGCCTATAATGTGATTTGTTCTCTGGTGCTTGACAACAAAATCAAGGACTTCTTCTAA 1101 0.396 MKFFFQEVLFQLSLIILWCLSVTIIFQQYGCAVSLSCNETVPAVIVFGDSIVDPGNNNYISTIIKCNFLPYGREFAGGNKPTGRFSNGLVPSDIIAAKFGVKKLLPAYLDPNLQLQDLLTGVSFASGGAGYDPLTSELVSVISLSDQLDMFREYKKKMKEAVGEIRTAIIISKSIYIVCIGSDDIANTYAQTPIRRAHYDISSYTDLMVSQASNFVQELYGLGARRIGVIGLPPIGCLPSQRTIGGGIQRACSDSENQAAILFNTKLLSQIDALKKQFSEARLVYLDIYNPILYIIQNPAIYGFEVTDRGCCGTGNIEVSILCNRYSQNTCSNSSSYIFWDSYHPTEEAYNVICSLVLDNKIKDFF* 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g01513 366 PANTHER GDSL ESTERASE/LIPASE EXL3 20 354 - -
Rops1g01513 366 FunFam GDSL esterase/lipase APG 33 362 - -
Rops1g01513 366 SUPERFAMILY SGNH hydrolase 43 359 - -
Rops1g01513 366 Pfam GDSL-like Lipase/Acylhydrolase 44 354 IPR001087 GO:0016788
Rops1g01513 366 Gene3D SGNH hydrolase 32 361 IPR036514 -
Rops1g01513 366 CDD SGNH_plant_lipase_like 42 360 IPR035669 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g01513 Rops-Chr1 32794238 32796596 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops1g01513 19 361 Pollen Coat Proteome AT1G75910 38.571 4.75e-74 231
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g01513 - - gmx:100810354 559.681