Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g01506 ATGGAAGAGGTTTGGAAAGACATAAATCTTGCTTCCTTGAATGACCAAAACACACGCCCCACAACAAACCGTTCCACCTTTGGAGGTGCAATGTTGCAAGACTTTCTGGGTCGACCCTATGGCATAGACCCACCAAACAGCATGCCATCTTCTGCTTCAGAAAGAGCTTCTCTTTACTGCCCTTCCTCTCCGGCCCCACCTTTAGTCACTGCTCTTAGCTTAAGCTCTCGCCCTGAGTTCCATTTTGATCCACTTAGACCAAAGGCTTCACATTTCGTGCACCCCAACAACAACCCTGCCACCACTAAGGCATCTTGTTTCAACAACTCATCACCATTTGAGAGCCTTGCCTGTGCATCTTCTTTGCCCTGTTTTGGTAGCAAGGGATTTGCTGAACCAGCTGATACAAACTTAGGAGACAGGCGAAATAAGCGTATGATAAAGAATCGTGAATCTGCTGCTCGATCACGAGCTAGAAAGCAGGCTTACACTAATGAACTGGAGCTTAAAGTTGGTCTCTTGCTAGAAGAGAATGCAAGACTCAAAAGACAACAACAAGAGTTGTGGGAAGCTGCAGCTGGTCAACAAAAGAAGAAGAGTAGCCTATATAGAACAATGACGGCACCATTTTGA 633 0.4597 MEEVWKDINLASLNDQNTRPTTNRSTFGGAMLQDFLGRPYGIDPPNSMPSSASERASLYCPSSPAPPLVTALSLSSRPEFHFDPLRPKASHFVHPNNNPATTKASCFNNSSPFESLACASSLPCFGSKGFAEPADTNLGDRRNKRMIKNRESAARSRARKQAYTNELELKVGLLLEENARLKRQQQELWEAAAGQQKKKSSLYRTMTAPF* 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g01506 210 SUPERFAMILY Leucine zipper domain 141 190 IPR046347 GO:0003700|GO:0006355
Rops1g01506 210 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 139 188 IPR004827 GO:0003700|GO:0006355
Rops1g01506 210 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 1 209 IPR043452 GO:0003700|GO:0045893
Rops1g01506 210 FunFam ABSCISIC ACID-INSENSITIVE 5-like protein 2 139 199 - -
Rops1g01506 210 Coils Coil 164 184 - -
Rops1g01506 210 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 144 159 IPR004827 GO:0003700|GO:0006355
Rops1g01506 210 MobiDBLite consensus disorder prediction 38 59 - -
Rops1g01506 210 Pfam bZIP transcription factor 141 192 IPR004827 GO:0003700|GO:0006355
Rops1g01506 210 Gene3D - 140 194 - -
Rops1g01506 210 SMART brlzneu 137 201 IPR004827 GO:0003700|GO:0006355
Rops1g01506 210 CDD bZIP_plant_BZIP46 141 195 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g01506 Rops-Chr1 32707419 32708569 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops1g01506 1 161 bZIP Transcription Factor Family AT4G35900 40.217 3.08e-19 81.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Rops1g01506 bZIP_1 4.9e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g01506 K14432 - qsu:112005648 184.882