Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g01430 ATGGCCATGGAGGGAAGAATACGTGAGGAGTTAACGCCTAGGTATTATGCCCTTTGCGCCATTGGAGGAATGCTTAGTGCTGGCACCACTCACCTTGCTACCACTCCTCTTGATGTCTTGAAAGTTAACATGCAGGTGCACCCAATTAAGTATTACAGCATTTCCTCGTGCTTTACTACCTTATTGCGGGAACAAGGGCCTTCTGTCCTCTGGAGAGGTTGGACCGGCAAGTTCTTTGGCTATGGTGCTCAAGGAGGATGCAGATTTGGTCTCTATGAATATTTTAAGGGGGTTTATTCTAATGTTTTGGTAGACCAGAACAGGAGTCTTGTTTTCTTTCTTAGTAGTGCTTCTGCTGAAGTGTTTGCCAATTTAGCTTTATGCCCATTTGAAGCTGTTAAAGTGAGGGTTCAAGCACAACCCTGTTTTGCTAAGGGCTTGTTTGATGGTGTTCCGAAACTATATGCATCAGAAGGCACACGAGGATTCTACCGTGGTCTTATTCCACTTTTGGGTCGGAACCTTCCATTTTCCATGGTCATGTTCTCAACATTTGAGCATTCTGTTGATTTTTTGTATCGCAATGTTGTCAAAAGAAAAAAGGAGGATTGTTCAAAAGTTCAACAGCTTGGTGTGACATGCTTAGCTGGATATGCTGCTGGATCTGTTGGTAGCTTCATTTCTAATCCTGCTGACAATATTGTATCTTCACTTTATAACAAAAAGGCTGATAGTCTCGTGCTGGCTATCAGAAAAATTGGGCTTGCCAATCTTTTTACCAGGAGCCTTCCTATTAGAATGATGCTGGTTGGTCCGTCTATAACTTTGCAGTGGTTTTTCTATGACACTATCAAAATTTTAGGTGGACTGCCAACTAGTGGTGAAGTTGCAACTGACTTGAGAGGAGATGGTGCAGACTAG 921 0.4289 MAMEGRIREELTPRYYALCAIGGMLSAGTTHLATTPLDVLKVNMQVHPIKYYSISSCFTTLLREQGPSVLWRGWTGKFFGYGAQGGCRFGLYEYFKGVYSNVLVDQNRSLVFFLSSASAEVFANLALCPFEAVKVRVQAQPCFAKGLFDGVPKLYASEGTRGFYRGLIPLLGRNLPFSMVMFSTFEHSVDFLYRNVVKRKKEDCSKVQQLGVTCLAGYAAGSVGSFISNPADNIVSSLYNKKADSLVLAIRKIGLANLFTRSLPIRMMLVGPSITLQWFFYDTIKILGGLPTSGEVATDLRGDGAD* 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g01430 306 FunFam Mitochondrial phosphate carrier protein 1, mitochondrial 17 288 - -
Rops1g01430 306 SUPERFAMILY Mitochondrial carrier 15 283 IPR023395 -
Rops1g01430 306 Gene3D Mitochondrial carrier domain 17 288 IPR023395 -
Rops1g01430 306 ProSiteProfiles Solute carrier (Solcar) repeat profile. 107 191 IPR018108 -
Rops1g01430 306 Pfam Mitochondrial carrier protein 113 195 IPR018108 -
Rops1g01430 306 Pfam Mitochondrial carrier protein 19 100 IPR018108 -
Rops1g01430 306 ProSiteProfiles Solute carrier (Solcar) repeat profile. 14 98 IPR018108 -
Rops1g01430 306 PANTHER SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED 9 297 IPR044677 GO:0005315|GO:1990547
Rops1g01430 306 ProSiteProfiles Solute carrier (Solcar) repeat profile. 208 287 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g01430 Rops-Chr1 31733628 31737680 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops1g01430 3 296 Chloroplast and Mitochondria Gene Families AT2G17270 67.458 5.63e-155 434
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g01430 K15102 - gmx:100788561 576.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops1g01430 1 31733628 31737680 Rops1g01430 1 31733628 31737680 ECH