LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Rops1g01420	ATGTCTTCTTCTAGATATGCTAGAAGCAGTGCCTTCTTCTATCTGTTTTTTGCAGTTCTTGTTGCAAAAACCAGCTTTTGCTTCTCTGCCAAGGTTTATGTAGTGTACATGGGAAGCAAAACTAGTGAAGACCCTGATGATATTTTGAAACACAATCATCAAATGCTTGCATCTGTTCATAGGGGAAGTATTGAGCAAGCCCAAGCTTCCCATGTTTATAGCTACAGACATGGTTTCAGAGGCTTTGCAGCCAAGTTGACTGATGAACAGGCTTATCAAATTTCAAAAATGCCTGGAGTGGTTTCTGTTTTTCCCAATGCTAAAAGAAAGCTGCACACCACTCATTCATGGGACTTCATAGGACTTCTGGATGATGAAAACATGGAGATTCCAGGGTACTCCACCAAAAACCAAGAAAATATCATCATCGGTTTCATTGATACAGGAATTTGGCCTGAATCCCCAAGCTTTAGAGACACTGACATGCCACCAATACCACGCGGATGGAAGGGTCATTGTCAATTGGGAGAAGCATTCAACGCTTCATCTTGCAACAGGAAAGTGATAGGAGCTAGATACTATATGAGTGGATATGAAGCAGAAGAAGGGTCAGACAGAAAAGTATCTTTCAGATCTGCTAGGGACAGCTCTGGTCATGGGAGCCATACAGCTTCCACAGCAGCAGGGCGCTATGTGGCAAACATGAATTATAAGGGGCTAGCAGCTGGAGGAGCTAGGGGAGGGGCACCTATGGCTAGGATTTCTGTGTACAAATCATGCTGGAATTCAGGTTGCTATGATGTGGACTTGCTAGCTGCCTTTGATGATGCCATAAGGGACGGGGTTCACATTATATCCTTATCTCTGGGTCCTGAATCTCCCCAAGGTGACTACTTCAATGATGCCATATCTGTGGGGTCATTCCATGCAGCTAGACATGGAGTACTGGTGGTAGCATCAGTTGGGAATGAAGGAAGTCCTGGTTCTGCAACAAACCTCGCACCTTGGATGATCACTGTAGCTGCTAGCTCAACAGATAGAGATTTCACCTCTGATGTTATATTAGGAAATGGTGTTAACATCAGGGGTGCAAGTCTCAGTCTCCTGGAAATGAATGCCTCCAGAAGAATAATTCCTGCATCTGAAGCCTTTGCAGGATATTTTACTCCTTATCAATCCAGTTACTGTGTGGATAGTTCTCTAAATAAGACCAAGGCCAAAGGGAAGGTTCTGGCGTGTCGACATGAAGAGGGTTCAACGGAGTCAAAGTTGGCAAAAAGTAGGGTAGTAAAAGAGGCTGGTGGAGTTGGGATGATACTTATTGATGAGGCGGATCAAGGTGTTGCCATCCCATTTGTGATCCCTTCAGCTGTTGTTGGGAGCAAAACAGGAGAACAGATTCTATACTATATCAATAGCACACGCATGCCTAAGTCAAGAATTTTAGGAGCCAAGACAGTACTAGGAGTTCAGCCTGCACCCCGTGCAGCAGCATTTTCTTCCAAGGGTCCCAATGCCTTAACCCCAGAAATTTTGAAGCCTGATATTACAGCTCCCGGATTAAACATCCTCGCAGCGTGGTCTCCAGCAGCAGCTGGAAACATGAAGTTCAATATTCTATCAGGAACTTCTATGGCGTGTCCTCATGTAACTGGAATTGCAACCTTAGTCAAAGCTGTGCATCCTTCATGGTCTCCATCAGCTATCAAATCTGCCATCATGACAACTGCAACAACTCTGGATAAGCAACATGAACCCATTAGAGCGGATCCTAATAGAAGAAGGGCTAATGCATTTGATTATGGATCAGGGTTTGTGAACCCTGCAAGAGTTCTAGATCCTGGTCTCGTCTATGATTCACAGCAAGAAGATTTTGTTGCATTCCTGTGTTCACTTGGTTATGATGAGAGGTCACTCCATCTTGTTACAAGAGACAACAGCACTTGTGATGGGGCATTCAAAACACCATCTGACCTCAACTATCCATCTATTGCAGTGCCCAATCTTGAAGACGACTTTTCAGTAACTCGAGTTGTAACTAATGTTGGAAAAGCAAGAAGTATATATAAAGCTGTAGTGTTGTCTCCTGCTGGAGTTAACGTTACAGTTGTGCCAAACCAGTTAGTCTTCACAAGGAGAGGACAGAAAATCAAGTTTACTGTGAATTTCAAAGTGGTCACTCCCTCAAAGGGCTATGCATTTGGGTTCTTGTCATGGAGGAACAGAAGATCACAGGTCACAAGTCCTTTAGTTGTCCAGGCTGCAACACCAAGCCTTGGGTTGGTCAGATAA	2292	0.442	MSSSRYARSSAFFYLFFAVLVAKTSFCFSAKVYVVYMGSKTSEDPDDILKHNHQMLASVHRGSIEQAQASHVYSYRHGFRGFAAKLTDEQAYQISKMPGVVSVFPNAKRKLHTTHSWDFIGLLDDENMEIPGYSTKNQENIIIGFIDTGIWPESPSFRDTDMPPIPRGWKGHCQLGEAFNASSCNRKVIGARYYMSGYEAEEGSDRKVSFRSARDSSGHGSHTASTAAGRYVANMNYKGLAAGGARGGAPMARISVYKSCWNSGCYDVDLLAAFDDAIRDGVHIISLSLGPESPQGDYFNDAISVGSFHAARHGVLVVASVGNEGSPGSATNLAPWMITVAASSTDRDFTSDVILGNGVNIRGASLSLLEMNASRRIIPASEAFAGYFTPYQSSYCVDSSLNKTKAKGKVLACRHEEGSTESKLAKSRVVKEAGGVGMILIDEADQGVAIPFVIPSAVVGSKTGEQILYYINSTRMPKSRILGAKTVLGVQPAPRAAAFSSKGPNALTPEILKPDITAPGLNILAAWSPAAAGNMKFNILSGTSMACPHVTGIATLVKAVHPSWSPSAIKSAIMTTATTLDKQHEPIRADPNRRRANAFDYGSGFVNPARVLDPGLVYDSQQEDFVAFLCSLGYDERSLHLVTRDNSTCDGAFKTPSDLNYPSIAVPNLEDDFSVTRVVTNVGKARSIYKAVVLSPAGVNVTVVPNQLVFTRRGQKIKFTVNFKVVTPSKGYAFGFLSWRNRRSQVTSPLVVQAATPSLGLVR*	764

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Rops1g01420	763	Pfam	Fibronectin type-III domain	658	752	IPR041469	-
	Rops1g01420	763	FunFam	Subtilisin-like protease SBT1.5	629	755	-	-
	Rops1g01420	763	SUPERFAMILY	Subtilisin-like	14	714	IPR036852	GO:0004252\|GO:0006508
	Rops1g01420	763	Gene3D	-	346	488	-	-
	Rops1g01420	763	FunFam	Subtilisin-like protease SBT5.3	22	112	-	-
	Rops1g01420	763	Pfam	Subtilase family	139	583	IPR000209	GO:0006508\|GO:0008236
	Rops1g01420	763	ProSitePatterns	Serine proteases, subtilase family, serine active site.	542	552	IPR023828	-
	Rops1g01420	763	Gene3D	Peptidase S8 propeptide/proteinase inhibitor I9	23	112	IPR037045	-
	Rops1g01420	763	CDD	Peptidases_S8_3	110	578	IPR034197	-
	Rops1g01420	763	Gene3D	-	629	755	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Rops1g01420	Rops-Chr1	31378451	31383122	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Rops1g01420	33	753	Subtilisin-like Serine Gene Family	AT2G04160	43.974	0.0	568

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Rops1g01420	-		-	gmx:100780538	1327.77

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