Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g01420 ATGTCTTCTTCTAGATATGCTAGAAGCAGTGCCTTCTTCTATCTGTTTTTTGCAGTTCTTGTTGCAAAAACCAGCTTTTGCTTCTCTGCCAAGGTTTATGTAGTGTACATGGGAAGCAAAACTAGTGAAGACCCTGATGATATTTTGAAACACAATCATCAAATGCTTGCATCTGTTCATAGGGGAAGTATTGAGCAAGCCCAAGCTTCCCATGTTTATAGCTACAGACATGGTTTCAGAGGCTTTGCAGCCAAGTTGACTGATGAACAGGCTTATCAAATTTCAAAAATGCCTGGAGTGGTTTCTGTTTTTCCCAATGCTAAAAGAAAGCTGCACACCACTCATTCATGGGACTTCATAGGACTTCTGGATGATGAAAACATGGAGATTCCAGGGTACTCCACCAAAAACCAAGAAAATATCATCATCGGTTTCATTGATACAGGAATTTGGCCTGAATCCCCAAGCTTTAGAGACACTGACATGCCACCAATACCACGCGGATGGAAGGGTCATTGTCAATTGGGAGAAGCATTCAACGCTTCATCTTGCAACAGGAAAGTGATAGGAGCTAGATACTATATGAGTGGATATGAAGCAGAAGAAGGGTCAGACAGAAAAGTATCTTTCAGATCTGCTAGGGACAGCTCTGGTCATGGGAGCCATACAGCTTCCACAGCAGCAGGGCGCTATGTGGCAAACATGAATTATAAGGGGCTAGCAGCTGGAGGAGCTAGGGGAGGGGCACCTATGGCTAGGATTTCTGTGTACAAATCATGCTGGAATTCAGGTTGCTATGATGTGGACTTGCTAGCTGCCTTTGATGATGCCATAAGGGACGGGGTTCACATTATATCCTTATCTCTGGGTCCTGAATCTCCCCAAGGTGACTACTTCAATGATGCCATATCTGTGGGGTCATTCCATGCAGCTAGACATGGAGTACTGGTGGTAGCATCAGTTGGGAATGAAGGAAGTCCTGGTTCTGCAACAAACCTCGCACCTTGGATGATCACTGTAGCTGCTAGCTCAACAGATAGAGATTTCACCTCTGATGTTATATTAGGAAATGGTGTTAACATCAGGGGTGCAAGTCTCAGTCTCCTGGAAATGAATGCCTCCAGAAGAATAATTCCTGCATCTGAAGCCTTTGCAGGATATTTTACTCCTTATCAATCCAGTTACTGTGTGGATAGTTCTCTAAATAAGACCAAGGCCAAAGGGAAGGTTCTGGCGTGTCGACATGAAGAGGGTTCAACGGAGTCAAAGTTGGCAAAAAGTAGGGTAGTAAAAGAGGCTGGTGGAGTTGGGATGATACTTATTGATGAGGCGGATCAAGGTGTTGCCATCCCATTTGTGATCCCTTCAGCTGTTGTTGGGAGCAAAACAGGAGAACAGATTCTATACTATATCAATAGCACACGCATGCCTAAGTCAAGAATTTTAGGAGCCAAGACAGTACTAGGAGTTCAGCCTGCACCCCGTGCAGCAGCATTTTCTTCCAAGGGTCCCAATGCCTTAACCCCAGAAATTTTGAAGCCTGATATTACAGCTCCCGGATTAAACATCCTCGCAGCGTGGTCTCCAGCAGCAGCTGGAAACATGAAGTTCAATATTCTATCAGGAACTTCTATGGCGTGTCCTCATGTAACTGGAATTGCAACCTTAGTCAAAGCTGTGCATCCTTCATGGTCTCCATCAGCTATCAAATCTGCCATCATGACAACTGCAACAACTCTGGATAAGCAACATGAACCCATTAGAGCGGATCCTAATAGAAGAAGGGCTAATGCATTTGATTATGGATCAGGGTTTGTGAACCCTGCAAGAGTTCTAGATCCTGGTCTCGTCTATGATTCACAGCAAGAAGATTTTGTTGCATTCCTGTGTTCACTTGGTTATGATGAGAGGTCACTCCATCTTGTTACAAGAGACAACAGCACTTGTGATGGGGCATTCAAAACACCATCTGACCTCAACTATCCATCTATTGCAGTGCCCAATCTTGAAGACGACTTTTCAGTAACTCGAGTTGTAACTAATGTTGGAAAAGCAAGAAGTATATATAAAGCTGTAGTGTTGTCTCCTGCTGGAGTTAACGTTACAGTTGTGCCAAACCAGTTAGTCTTCACAAGGAGAGGACAGAAAATCAAGTTTACTGTGAATTTCAAAGTGGTCACTCCCTCAAAGGGCTATGCATTTGGGTTCTTGTCATGGAGGAACAGAAGATCACAGGTCACAAGTCCTTTAGTTGTCCAGGCTGCAACACCAAGCCTTGGGTTGGTCAGATAA 2292 0.442 MSSSRYARSSAFFYLFFAVLVAKTSFCFSAKVYVVYMGSKTSEDPDDILKHNHQMLASVHRGSIEQAQASHVYSYRHGFRGFAAKLTDEQAYQISKMPGVVSVFPNAKRKLHTTHSWDFIGLLDDENMEIPGYSTKNQENIIIGFIDTGIWPESPSFRDTDMPPIPRGWKGHCQLGEAFNASSCNRKVIGARYYMSGYEAEEGSDRKVSFRSARDSSGHGSHTASTAAGRYVANMNYKGLAAGGARGGAPMARISVYKSCWNSGCYDVDLLAAFDDAIRDGVHIISLSLGPESPQGDYFNDAISVGSFHAARHGVLVVASVGNEGSPGSATNLAPWMITVAASSTDRDFTSDVILGNGVNIRGASLSLLEMNASRRIIPASEAFAGYFTPYQSSYCVDSSLNKTKAKGKVLACRHEEGSTESKLAKSRVVKEAGGVGMILIDEADQGVAIPFVIPSAVVGSKTGEQILYYINSTRMPKSRILGAKTVLGVQPAPRAAAFSSKGPNALTPEILKPDITAPGLNILAAWSPAAAGNMKFNILSGTSMACPHVTGIATLVKAVHPSWSPSAIKSAIMTTATTLDKQHEPIRADPNRRRANAFDYGSGFVNPARVLDPGLVYDSQQEDFVAFLCSLGYDERSLHLVTRDNSTCDGAFKTPSDLNYPSIAVPNLEDDFSVTRVVTNVGKARSIYKAVVLSPAGVNVTVVPNQLVFTRRGQKIKFTVNFKVVTPSKGYAFGFLSWRNRRSQVTSPLVVQAATPSLGLVR* 764
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g01420 763 Pfam Fibronectin type-III domain 658 752 IPR041469 -
Rops1g01420 763 FunFam Subtilisin-like protease SBT1.5 629 755 - -
Rops1g01420 763 SUPERFAMILY Subtilisin-like 14 714 IPR036852 GO:0004252|GO:0006508
Rops1g01420 763 Gene3D - 346 488 - -
Rops1g01420 763 FunFam Subtilisin-like protease SBT5.3 22 112 - -
Rops1g01420 763 Pfam Subtilase family 139 583 IPR000209 GO:0006508|GO:0008236
Rops1g01420 763 ProSitePatterns Serine proteases, subtilase family, serine active site. 542 552 IPR023828 -
Rops1g01420 763 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 23 112 IPR037045 -
Rops1g01420 763 CDD Peptidases_S8_3 110 578 IPR034197 -
Rops1g01420 763 Gene3D - 629 755 - -
Rops1g01420 763 ProSiteProfiles Serine proteases, subtilase domain profile. 116 612 - -
Rops1g01420 763 FunFam Subtilisin-like protease SBT1.5 140 369 - -
Rops1g01420 763 Gene3D Peptidase S8/S53 domain 140 625 IPR036852 GO:0004252|GO:0006508
Rops1g01420 763 CDD PA_subtilisin_like 352 481 - -
Rops1g01420 763 PRINTS Subtilisin serine protease family (S8) signature 215 228 IPR015500 -
Rops1g01420 763 PRINTS Subtilisin serine protease family (S8) signature 541 557 IPR015500 -
Rops1g01420 763 PRINTS Subtilisin serine protease family (S8) signature 138 157 IPR015500 -
Rops1g01420 763 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 33 752 IPR045051 -
Rops1g01420 763 Pfam PA domain 384 467 IPR003137 -
Rops1g01420 763 Pfam Peptidase inhibitor I9 32 112 IPR010259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g01420 Rops-Chr1 31378451 31383122 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops1g01420 33 753 Subtilisin-like Serine Gene Family AT2G04160 43.974 0.0 568
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g01420 - - gmx:100780538 1327.77