Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g01407 ATGATTTTTGATAAAATCGCAGCTTTAGTATCCTCCAAATTGCCCACCCCACAATCCTCCCTCTCTGCCCTGCCCCACTCTCTTCCTTTCACCAACCACAACAACAACCTACGAATCTCTTCCTCTCTTCAGGATCTTTCCTCGTACACCAACCTCGATGCTGGTGTCCCCACCCATTTGAAGCAACCCCTCTACAAGCCTCAAGGGGGAACAACGACCAAGAAATGCATCAGGGCTATCAGGCTTGTACTGTGTCTTACATTGTTTCTATTACTAACCTACTTGGTTTTGATGTTTGTTTATTCTTTTTGGAATTATGGGTCTGGCAAGTATTATGTTGTGCTTGATTGTGGGAGTACTGGGACAAGGGTTTATGTGTATCATGCTTCCATTCAATATAAGAGGTATAGTAGTCTTCCTATAGCGATCAAGTCATTGAGGGATGGCTTGCATAAGAAGCCTATTGGGCGTGCCTACGATCGAATGGAAACTGAACCTGGCCTTGATAAGTTGGTGTATAATGTGTCTGGGTTGAAGGGTGCATTGAAACCATTAGTTAGGTGGGCAAAGAAGCAAATACCGGTGCATTCTCATAAGACTACTTCTTTGTTCCTTTATGCTACTGCTGGTGTTAGGAGGCTTCCTTTGAATGAGTCTAAATGGCTGCTAGATAATGCTTGGTCTGTGCTTAAGGACTCTCCTTTTATGTGTAGGAAGGATTGGGTTAAGATTATCTCGGGTACTGAGGAAGCTTACTTTGGATGGATATCCCTTAATTATCATAGTGGTGTCTTGGGTGTTAGACCTAGGAAGGCTACTTATGGTGCACTTGACTTGGGTGGCTCCTCCTTGCAGGTTACTTTTGAGAGTGATCAACAACTGAATAGTGAGACTAGCTTGTATGTTAGGATTGGATCAGTGAACCACCATCTCACTGCATATTCTCTCTCAGGCTATGGTCTCAATGAGGCATTTGGCAGGTCTGTGGTGCATCTTTTTAGGAAAGAGTTTGGATCTGCCAATGCAGATATTGCTAATAGAAACATAGAACTAAAACATCCTTGCTTGCAGTCTGGGTACAAGGAGCAATATATGTGCTCTCATTGTTCTTCTGATAACAAAGGTAGAAGTCTTGCCGTTAATGAGAAACAACAGGGTAAGCAAGGAGTATCAGGAACTCCATTGGTGCTTATTGGTGCTCCAAATTGGCAACAATGCAGTGCACTTGCAAAAGTTGTTGTCAATTTGTCTGAATGGTCCAATCTCAGTGCAGGACTGGATTGTGGAGTGCAACCTTGTGCTTTGCGTGAAAATCTCCCTCACCCATATGGCCACTTTTATGTGATTTCTGGATTTTATGTGGTGTATCGGTTTTTCAGCTTGACTTCTGAGGCCACACTTGATGATGTATTGGAAAAGGGTAAGGATTTCTGTGACAAAAGATGGGATGTTGCAAAGAATAGTGTTGCTCCTCAGCCCTTTATTGAGCAGTACTGCTTTAGGGCACCTTACATTGCCTCGCTGCTAAGAGAGGGTTTGCACATCAATGATAACCAAATAACTGTTGGCTCTGGAAGCATCACTTGGACACTTGGGGTTGCTTTGTTGGAAGCTGGGAAGGCATATTCTACTAGATTTGGGCTTCATGACTTGAAATTGCTCCAAATGAAGATAAATCCTCTTGTTCTTATGCCCATTTTGTTGATATCTTTTATTCTTCTTTGTGCATTATCAAGCGTTTGCAATTGGATGCCAAGGTTTTTCCGGAGGCAATATCTTCCCATTTTCAGGCATAACAGTGTTTCCAGTGCTTCTGTTCTTAATATCCCATCTCCTTTTCGGTTCCGAAGTTGGAGTCCAATGAGATCTGGGGATGGAAGAATAAAGATGCCACTCAGTCCAACAATTGCAGGTTCACAAGGAAGCCCATTTGGCCTGGCACATGGTTTTGGTGATAACAATGGTGGTATTCAGCTTATGGAGTCTTCCTTATACCCATCAGCTAGTGGCGTCTCACATAGTTATTCCTCAAACAGTTTAGGGCAGATGCAGTTTGACGGTGGTAATATGGGTGCCTTCTGGTCCCCCCACAGAAGTCAGATGCGTCTGCAGAGTAGGAGATCACAGTCTCGAGAAGATCTGAATTCCTCATTGGCTGAAGCACACCTGGTGAAGGTTTAA 2181 0.4351 MIFDKIAALVSSKLPTPQSSLSALPHSLPFTNHNNNLRISSSLQDLSSYTNLDAGVPTHLKQPLYKPQGGTTTKKCIRAIRLVLCLTLFLLLTYLVLMFVYSFWNYGSGKYYVVLDCGSTGTRVYVYHASIQYKRYSSLPIAIKSLRDGLHKKPIGRAYDRMETEPGLDKLVYNVSGLKGALKPLVRWAKKQIPVHSHKTTSLFLYATAGVRRLPLNESKWLLDNAWSVLKDSPFMCRKDWVKIISGTEEAYFGWISLNYHSGVLGVRPRKATYGALDLGGSSLQVTFESDQQLNSETSLYVRIGSVNHHLTAYSLSGYGLNEAFGRSVVHLFRKEFGSANADIANRNIELKHPCLQSGYKEQYMCSHCSSDNKGRSLAVNEKQQGKQGVSGTPLVLIGAPNWQQCSALAKVVVNLSEWSNLSAGLDCGVQPCALRENLPHPYGHFYVISGFYVVYRFFSLTSEATLDDVLEKGKDFCDKRWDVAKNSVAPQPFIEQYCFRAPYIASLLREGLHINDNQITVGSGSITWTLGVALLEAGKAYSTRFGLHDLKLLQMKINPLVLMPILLISFILLCALSSVCNWMPRFFRRQYLPIFRHNSVSSASVLNIPSPFRFRSWSPMRSGDGRIKMPLSPTIAGSQGSPFGLAHGFGDNNGGIQLMESSLYPSASGVSHSYSSNSLGQMQFDGGNMGAFWSPHRSQMRLQSRRSQSREDLNSSLAEAHLVKV* 727
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g01407 726 Gene3D - 105 246 - -
Rops1g01407 726 Pfam GDA1/CD39 (nucleoside phosphatase) family 109 536 IPR000407 GO:0016787
Rops1g01407 726 Gene3D Exopolyphosphatase. Domain 2 247 524 - -
Rops1g01407 726 MobiDBLite consensus disorder prediction 697 718 - -
Rops1g01407 726 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 78 541 IPR000407 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g01407 Rops-Chr1 31262068 31265858 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops1g01407 1 726 Nodulin-like Gene Family AT4G19180 57.349 0.0 827
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g01407 - - adu:107487370 1090.49