Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g01404 ATGGCGACAATAACAGCTTCAGGATCATTAGGTAGTGACACATGGAAGGCCCATTTGGCCATGGCACTGGTGCAGCTATTCTATGGAGGTTACCATGTCATCACCAAAGTTGCCCTTAATGTTGGAGTCAACCAATTGGTCTTCTGCCTCTACCGGGATCTCCTTGCTTTCTCAATTGTTGCTCCTATAGCTTTTTTCAGAGAAAGACGGACAAGACCACCAATTACCAAGCAGATACTGATGTCATTCTTCTTTCTTGGATTAACTGGGATATTTGGCAACCAACTCTTGTTTCTTATTGGTTTGAGTTATACTAATCCAACTTATGCCGCTGCTGTACAGCCAGCCATTCCAGTCTTTACATTTCTGTTTGCTGTGATGATGGGTACAGAAAGAGTGAACTTACGCAGATATGATGGTCTGGCAAAGGTTGGAGGAACTCTTATCTGTGTTTTTGGTGCCGTATTGATGGTTTTGTATCGTGGTCCAGCTTTGATAGGTTATACAGAAATAGATCATGTCTTACAAAATGAAATAAGTACCAGAGGTCAGCCAGAGCCTTCTGGATGGTTCGTCAGTGGTTTACAGGATCTTGGATTTGACCATTTTGAACTTGGGGTGCTGTGCTTGATAGGGAACTGCATGTGCATGGCTGCTTTTCTAGCCATTCAGGCACCATTATTAAAAAAGTATCCTGCGAACCTGTCTGTCACAGCGTATTCGTTCTTCTTTGGAGTTGCACTAATGATGATAGTATCATTTTTCATGACTAACGAGTCAACTGACTGGATTTTGACGCAATCAGAAATACTTGCTGTTATTTATGCCGGAACTATTGCATCTGCCCTTAACTATGGAATCGTTACATGGAGCAACAAGATCTTGGGCCCAGCCATAGTTTCCCTTTATAATCCACTTCAACCTGCGTTTTCTGCCCTCCTGTCCCAAATTTTTCTTGGAAGTCCAATTTACTTGGGAAGTATCATTGGGGGATTTTTTATCATAGCCGGTCTATATACGGTTACTTGGGCATCTTATAAAGAAAGGCAAGCAACTGTTGGAGTTACTTCTCATGGCTCTTGGGTCTCTGAACCGCTTATTCATGATAAAAGTGCATTCCAAAGAGGTCACATCTTTTCAGGATCCTCTAGTGTATCCCCAAGCATAAAGCCATCAGATTAA 1182 0.4222 MATITASGSLGSDTWKAHLAMALVQLFYGGYHVITKVALNVGVNQLVFCLYRDLLAFSIVAPIAFFRERRTRPPITKQILMSFFFLGLTGIFGNQLLFLIGLSYTNPTYAAAVQPAIPVFTFLFAVMMGTERVNLRRYDGLAKVGGTLICVFGAVLMVLYRGPALIGYTEIDHVLQNEISTRGQPEPSGWFVSGLQDLGFDHFELGVLCLIGNCMCMAAFLAIQAPLLKKYPANLSVTAYSFFFGVALMMIVSFFMTNESTDWILTQSEILAVIYAGTIASALNYGIVTWSNKILGPAIVSLYNPLQPAFSALLSQIFLGSPIYLGSIIGGFFIIAGLYTVTWASYKERQATVGVTSHGSWVSEPLIHDKSAFQRGHIFSGSSSVSPSIKPSD* 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g01404 393 PANTHER WAT1-RELATED PROTEIN 19 349 IPR030184 GO:0016020|GO:0022857
Rops1g01404 393 SUPERFAMILY Multidrug resistance efflux transporter EmrE 52 160 - -
Rops1g01404 393 SUPERFAMILY Multidrug resistance efflux transporter EmrE 243 347 - -
Rops1g01404 393 Pfam EamA-like transporter family 205 342 IPR000620 GO:0016020
Rops1g01404 393 Pfam EamA-like transporter family 17 158 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g01404 Rops-Chr1 31249473 31253883 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops1g01404 100 368 Nodulin-like Gene Family AT5G45370 63.736 3.26e-124 358
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g01404 - - psat:127119930 612.838