Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g01383 ATGAAAAATGGAAGCTTGGAAAACTGGTTGCATCCGACCACAGAAATTGCATATCGGCCCAAACTATTAGACCTTAAGCAAAGGTTGAATATTATTGCTAATGTTGCTGCAACATTTCATTATCTTCACTATGAATGTGAGCAACCTATCATTCATTGTTGTGATCTCAAGCCTAGCAATGTTCTTCTCTATGAGTGCATGGTAGCTCATTTGAGTGATTTTGGCTTAGCAAGGTTACTCTCAAGTATTGGAGTCTCTTCAATGCAAAGTAGCACAATTGGAATAAAGGGGACTATTGGTTATGCTCCTCCAGAGTATGGAATGAGTTATGAGGTGTCAATGATATGTATAGCTTCGGGATTCTGGTTCTAG 372 0.3898 MKNGSLENWLHPTTEIAYRPKLLDLKQRLNIIANVAATFHYLHYECEQPIIHCCDLKPSNVLLYECMVAHLSDFGLARLLSSIGVSSMQSSTIGIKGTIGYAPPEYGMSYEVSMICIASGFWF* 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g01383 123 SUPERFAMILY Protein kinase-like (PK-like) 1 110 IPR011009 -
Rops1g01383 123 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 1 113 - -
Rops1g01383 123 Pfam Protein kinase domain 1 106 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops1g01383 123 Gene3D Transferase(Phosphotransferase) domain 1 1 116 - -
Rops1g01383 123 ProSiteProfiles Protein kinase domain profile. 1 123 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g01383 Rops-Chr1 30809897 30810413 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops1g01383 1 114 Receptor kinase-like Gene Family AT3G47580 52.542 5.41e-33 119
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Rops1g01383 Pkinase 1.1e-11 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g01383 - - gmx:100792724 176.022