Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g01369 ATGGCAGGGCAATCACGGAAATGGACGATATTGGTGGCTACCATATGGATTCAAGCATTCACTGGCACCAATTTTGATTTCTCAGATTACTCTTCTGCCATGAAATCAGTCCTCAACATATCACAGGTTCAACTCAACTACCTTGCCACAGCAAACGACATGGGCAAGCTCTTTGGTTGGTCCTCTGGTCTTGCTCTCATGTACCTTCCACTCTCTCTTGTCATCTTCATTGCTGCTTTCATGGGCTTCCTTGGCTATGGCCTCCAATGGCTTCTCATCAACAATATCATCTCTTTGCCTTATTTTCTGGTGTTTCTTCTATGTCTGTTGAGTGGCTGTAGCATCTGTTGGTTCAACACAGTGTGTTTTGTTCTCTGCATTAGAAATTTCCCAGTTAACAGACCCCTTGCATTATCACTCACTGTGAGTTTCAATGGTGTAAGTGCAGCACTCTACACTCTTGCTGCAAATTCAATAGACCCTTCATCTGATGCACTGTATCTTCTTTTAAATGCCCTTGTTCCCCTTCTCACTTCCCTTGCAGCATTTGTCCCAATTCTTCGCCAACCACCTTTAGATTCTCTTTCTCCAAATGCTGCTCGCAAGAACTCAGTGATATTTCTAATATTGAACATCTTAGCCATTTTCACTGGCCTTTATCTCCTTCTCTTTGGCTCAACTTCTGATGAAGCCACCGCAAGGCTCTACTTTGGTGGAGCTCTTTTGCTCCTCATATCACCACTGTGTATTCCTGGCATCATATATGCAAGAGATTGGTTTCACCGAGCTGTTCATTCTAGCTTTAGAATGGAAGGTTCTGGCTTCATTCTTGTTCATGTTAATGATCTTGAGCTTCATAAAGAACTCATTACCTGTCAAAACAGTGCTCTCAGCAATGGAGATGGTCACAGTATACTCAGTGACAATGGATCCATGAATGGAATTCAAAGGGCCAAAAGTAGTGATGTGTGTTGTGAGAGAATGCTTGGTCAGGATCAATTGTCAATGCTAGGAGAAGAGCATTCAGCTGCAGTGGTTGTTAGAAGGTTGGATTTTTGGCTTTATTATGTAGCATACTTCTGTGGAGGTACAATTGGTCTTGTCTACAGCAATAATCTGGGACAGATAGCTCAATCTTTAGGACTGAGTTCTAAAACATCTACCCTTGTCACACTATACTCATCCTTTTCCTTCTTTGGACGCTTACTTTCAGCTGCACCAGACTATATTAGAAATAAGTTCTACTTTGCAAGGACCGGATGGCTAACCATTGCACTTATACCAACCCCAATTGCATTCATCTTGCTTGCTGTATCAGACAGTGCTGTGGCAATTAATACAGGCACTGCACTAATTGGTTTGAGTTCTGGATTCATATTTGCAGCTGCTGTAGCAATTACATCTGAGCTGTTTGGACCTGAGAGTGTGAGTGTCAATCACAACATTCTCATAACAAATATCCCAATTGGGTCACTTCTCTATGGTTTTCTTGCTGCAGTAGTTTATGATGCCAATGCTAATTCAGAACATGGAAACATAATGTCTGACTCACTAGTGTGCATGGGAAGGAAGTGCTACTTTTGGACATTTGTTTGGTGGGGATGCATATCTGTCCTTGGACTAGCTTCTAGTGTGCTGTTATTCTTAAGAACCAAACATGCATATGATCATTTTGAGAGACACCGAATTTCAGCTCAATCTATTGTGTCTTAA 1713 0.4186 MAGQSRKWTILVATIWIQAFTGTNFDFSDYSSAMKSVLNISQVQLNYLATANDMGKLFGWSSGLALMYLPLSLVIFIAAFMGFLGYGLQWLLINNIISLPYFLVFLLCLLSGCSICWFNTVCFVLCIRNFPVNRPLALSLTVSFNGVSAALYTLAANSIDPSSDALYLLLNALVPLLTSLAAFVPILRQPPLDSLSPNAARKNSVIFLILNILAIFTGLYLLLFGSTSDEATARLYFGGALLLLISPLCIPGIIYARDWFHRAVHSSFRMEGSGFILVHVNDLELHKELITCQNSALSNGDGHSILSDNGSMNGIQRAKSSDVCCERMLGQDQLSMLGEEHSAAVVVRRLDFWLYYVAYFCGGTIGLVYSNNLGQIAQSLGLSSKTSTLVTLYSSFSFFGRLLSAAPDYIRNKFYFARTGWLTIALIPTPIAFILLAVSDSAVAINTGTALIGLSSGFIFAAAVAITSELFGPESVSVNHNILITNIPIGSLLYGFLAAVVYDANANSEHGNIMSDSLVCMGRKCYFWTFVWWGCISVLGLASSVLLFLRTKHAYDHFERHRISAQSIVS* 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g01369 570 Pfam Nodulin-like 7 251 IPR010658 -
Rops1g01369 570 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 8 556 - -
Rops1g01369 570 SUPERFAMILY MFS general substrate transporter 6 553 IPR036259 -
Rops1g01369 570 Gene3D MFS general substrate transporter like domains 346 559 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g01369 Rops-Chr1 30431026 30435037 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops1g01369 1 567 Nodulin-like Gene Family AT1G31470 59.227 0.0 625
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g01369 - - gmx:100775393 956.051
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops1g01369 1 30431026 30435037 Rops1g01369 1 30431026 30435037 ECH