Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g01364 ATGCAATATCGAAACCCAAGGCAGTGTCTACGTTCGTCTGCACTGCTGATTGTTGCTATGGGCATTTGTCTGATCAAATGGCAATGGCTGTGGCTTCTTTTTGTTCAGCTGATACATATTGTAATTAATAAAAGTGGAGCGATCAGTCCTGATGGTGAGGTACTTCTCAGCTTCAGGACAGCAGTTGTTAGTTCTGATGGTATCCTGTTACAATGGAGGCCAGAGGATCCTGACCCATGTAACTGGAAAGGAGTGAAATGTGATCAAAAAACCAAGAGAGTAACACATCTGAGCCTACCTCACCATAAGTTAAGTGGGTCTTTATCAACTGACCTCGGGAAGCTAGAGCATCTGAGACTTCTTGCTCTTCATAACAACAACTTCTATGGGACAATTCCATCAGAATTGGGAAATTGCACTGAATTGCAGGGAATATTTTTACAGGGTAATTACCTTAGTGGAATGATTCCAAGTGAAATAGGAAACCTTTCGCAGCTTCAAAATTTGGATATATCAAGCAATTCCCTTAGTGGGAGTATTCCAGCATCACTTGGGAAGTTGTATAATCTCAAATATTTCAATGTCTCAACCAATTTTCTAGTTGGACCAATACCTTCTGATGGTATCCTTGCCAACTTTATTGGAAGCTCATTTGTTGGAAATCGTGGTTTGTGTGGAGTGCAAATCGATTCAACATGTAAAGCTGATGGTTCGCCAGAGACAAACAATCAATCTACTTCCTCAGACCAAAATCAAACTGGAAAGAAGAAATATTCTGGCAGACTGCTCATCAGTGCATCAGCAACTGTGGGTGCCCTACTTTTGGTGGCACTAATGTGCTTCTGGGGTTGTTTCCTTTATAAGAAGTTTGGTAAAAATGACAAAATAAGTCTGGCCATGGATGTTGGTGGAGGGGCCTCAATAGTGATGTTTCATGGAGACCTACCATATACCTCAAAAGACATCATTAAGAAACTAGAGACTTTGAATGAGGAACACATAATAGGGATAGGAGGATTTGGAACTGTTTACAAGCTTGCGATGGATGATGGGAATGTATTTGCTTTGAAAAGAATTGTAAAGTTGAATGAGGGCTTCGATCGATTTTTCGAGAGGGAGCTTGAAATTCTTGGTAGCATCAAACACCGTTATCTAGTGAACTTACGAGGATATTGCAATTCACCTACATCAAAGTTGTTAATATATGACTACCTACCTGGTGGTAGTCTTGATGAAGTTCTTCATGAAAGATCTGAGCAACTAGACTGGGATTCACGCTTGAATATAATCTTGGGAGCTGCAAAAGGGCTTGCCTACTTGCACCATGATTGTTCCCCTAGGATCATACACCGAGACATAAAATCAAGCAATATTTTGGTTGATGGAAAATTGGATGCTCGAGTCTCTGATTTTGGACTTGCCAAACTTCTGGAGGATGAAGAATCTCACATCACCACTATTGTTGCTGGAACATTTGGTTATCTAGCTCCAGAGTATATGCAAAGTGGCAGAGCAACTGAGAAGACTGATGTGTATAGTTTTGGTGTGTTGACACTTGAAGTGCTGAGTGGAAAGCGGCCAACAGATGCATCATTCATTGAAAAGGGTCTCAATATTGTTGGTTGGTTGAATTTTCTTATTACCGAAGATAGGGCAAGGGAAATTGTTGATCCGCAATGTGAGGGGGTGCAAGTGGAGAGCCTTGATGCCTTGCTCTCGGTGGCTATTCAGTGTGTTTCCTCAAGTCCAGAGGATCGACCCACCATGCACCGAGTGGTCCAGTTGCTTGAATCGGAGGTCGTAACTCCATGCCCAAGTGACTTCTATGACTCCAACTCCGACTAG 1845 0.4201 MQYRNPRQCLRSSALLIVAMGICLIKWQWLWLLFVQLIHIVINKSGAISPDGEVLLSFRTAVVSSDGILLQWRPEDPDPCNWKGVKCDQKTKRVTHLSLPHHKLSGSLSTDLGKLEHLRLLALHNNNFYGTIPSELGNCTELQGIFLQGNYLSGMIPSEIGNLSQLQNLDISSNSLSGSIPASLGKLYNLKYFNVSTNFLVGPIPSDGILANFIGSSFVGNRGLCGVQIDSTCKADGSPETNNQSTSSDQNQTGKKKYSGRLLISASATVGALLLVALMCFWGCFLYKKFGKNDKISLAMDVGGGASIVMFHGDLPYTSKDIIKKLETLNEEHIIGIGGFGTVYKLAMDDGNVFALKRIVKLNEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLIYDYLPGGSLDEVLHERSEQLDWDSRLNIILGAAKGLAYLHHDCSPRIIHRDIKSSNILVDGKLDARVSDFGLAKLLEDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLTLEVLSGKRPTDASFIEKGLNIVGWLNFLITEDRAREIVDPQCEGVQVESLDALLSVAIQCVSSSPEDRPTMHRVVQLLESEVVTPCPSDFYDSNSD* 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g01364 614 MobiDBLite consensus disorder prediction 235 254 - -
Rops1g01364 614 ProSiteProfiles Protein kinase domain profile. 329 601 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops1g01364 614 Gene3D Ribonuclease Inhibitor 49 234 IPR032675 -
Rops1g01364 614 SUPERFAMILY Protein kinase-like (PK-like) 313 596 IPR011009 -
Rops1g01364 614 Gene3D Phosphorylase Kinase; domain 1 305 404 - -
Rops1g01364 614 SMART serkin_6 329 601 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops1g01364 614 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 91 597 - -
Rops1g01364 614 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 48 210 - -
Rops1g01364 614 FunFam LRR receptor-like serine/threonine-protein kinase FEI 1 303 404 - -
Rops1g01364 614 SUPERFAMILY L domain-like 49 209 - -
Rops1g01364 614 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 405 607 - -
Rops1g01364 614 Pfam Leucine rich repeat N-terminal domain 50 88 IPR013210 -
Rops1g01364 614 Gene3D Transferase(Phosphotransferase) domain 1 405 602 - -
Rops1g01364 614 ProSitePatterns Serine/Threonine protein kinases active-site signature. 448 460 IPR008271 GO:0004672|GO:0006468
Rops1g01364 614 ProSitePatterns Protein kinases ATP-binding region signature. 335 361 IPR017441 GO:0005524
Rops1g01364 614 Pfam Protein kinase domain 331 594 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g01364 Rops-Chr1 30382642 30393608 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops1g01364 20 605 Receptor kinase-like Gene Family AT2G35620 76.280 0.0 893
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIa Rops1g01364 Pkinase 5.4e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g01364 - - gmx:100819230 1104.35